rlmG:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''rlmG''  
''rlmG''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ygjO, ECK3074, b3084, JW5513''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ygjO, ECK3074, b3084, JW5513''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, JW5513, rsmD''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted methyltransferase small domain<ref name='LIB:Riley_2006'/>, B3084<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgjO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RlmG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted methyltransferase small domain<ref name='LIB:Riley_2006'/>, B3084<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgjO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RlmG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3074, JW5513, rsmD, ygjO, b3084''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=rlmG&loc=MG1655:3233897..3232761,W3110:3234531..3233395,REL606:3167556..3168692 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3167556&end=3168692&gene=rlmG&aa=mskfyhsggpmshldngfrsltlqrfpatddvnplqaweaadeyllqqlddteirgpvlilndafgalscalaehkpysigdsyiselatrenlrlngidessvkfldstadypqqpgvvlikvpktlalleqqlralrkvvtsdtriiagakardihtstlelfekvlgpttttlawkkarlinctfnepqladapqtvswklegtdwtihnhanvfsrtgldigarffmqhlpenlegeivdlgcgngvigltlldknpqakvvfvdespmavassrlnvetnmpealdrcefminnalsgvepfrfnavlcnppfhqqhaltdnvawemfhharrclkingelyivanrhldyfhklkkifgncttiatnnkfvvlkavklgrrr Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rlmG+AND+escherichia+coli Pubmed(rlmG)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rlmG Textpresso(rlmG)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rlmG&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7603]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004156&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rlmG&loc=MG1655%3A3233897..3232761,W3110%3A3234531..3233395,REL606%3A3167556..3168692,BW2952%3A3119909..3121045]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3119909&end=3121045&gene=rlmG&aa=mskfyhsggpmshldngfrsltlqrfpatddvnplqaweaadeyllqqlddteirgpvlilndafgalscalaehkpysigdsyiselatrenlrlngidessvkfldstadypqqpgvvlikvpktlalleqqlralrkvvtsdtriiagakardihtstlelfekvlgpttttlawkkarlinctfnepqladapqtvswklegtdwtihnhanvfsrtgldigarffmqhlpenlegeivdlgcgngvigltlldknpqakvvfvdespmavassrlnvetnmpealdrcefminnalsgvepfrfnavlcnppfhqqhaltdnvawemfhharrclkingelyivanrhldyfhklkkifgncttiatnnkfvvlkavklgrrr]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rlmG+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rlmG]]&nbsp;&nbsp;


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Latest revision as of 21:42, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rlmG

Gene Synonym(s)

ygjO, ECK3074, b3084, JW5513[1][2], JW5513, rsmD

Product Desc.

23S rRNA m2G1835 methyltransferase[2][3]

23S rRNA mG1835 methyltransferase, SAM-dependent[4]

Product Synonyms(s)

predicted methyltransferase small domain[1], B3084[2][1], YgjO[2][1], RlmG[2][1] , ECK3074, JW5513, rsmD, ygjO, b3084

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ygjO[2]

Regulation/Activity
Quick Links



        

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Notes

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RlmG methyltransferase mutants have a disadvantage in competitve growth cultures with wild type (Sergiev, 2006). The rsmD gene name usage was based on an erroneous prediction that RlmG was a small subunit modification enzyme (Bujnicki, 2002).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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