yjgI:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yjgI''  
''yjgI''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4243, b4249, JW4207''<ref name='LIB:Riley_2006'/>
''ECK4243, b4249, JW4207''<ref name='LIB:Riley_2006'/>, JW4207'', ''bcdA''<ref name='PMID:21059164'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain product<ref name='LIB:Riley_2006'/>, B4249 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjgI product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain<ref name='LIB:Riley_2006'/>, B4249<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjgI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4243, JW4207, b4249''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=yjgI&loc=MG1655:4472076..4471363,W3110:4478733..4478020,REL606:4457330..4456617,DH10B:4573884..4573171 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4573884&end=4573171&gene=yjgI&aa=mgaftgktvlilggsrgigaaivrrfvtdganvrftyagskdaakrlaqetgatavftdsadrdavidvvrksgaldilvvnagigvfgealelnaddidrlfkinihapyhasveaarqmpeggriliigsvngdrmpvagmaayaasksalqgmarglardfgprgitinvvqpgpidtdanpangpmrdmlhslmaikrhgqpeevagmvawlagpeasfvtgamhtidgafga Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yjgI+AND+escherichia+coli Pubmed(yjgI)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yjgI Textpresso(yjgI)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yjgI&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yjgI&loc=MG1655%3A4472076..4471363,W3110%3A4478733..4478020,REL606%3A4457330..4456617,DH10B%3A4573884..4573171,BW2952%3A4410098..4410811]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4410098&end=4410811&gene=yjgI&aa=mgaftgktvlilggsrgigaaivrrfvtdganvrftyagskdaakrlaqetgatavftdsadrdavidvvrksgaldilvvnagigvfgealelnaddidrlfkinihapyhasveaarqmpeggriliigsvngdrmpvagmaayaasksalqgmarglardfgprgitinvvqpgpidtdanpangpmrdmlhslmaikrhgqpeevagmvawlagpeasfvtgamhtidgafga]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yjgI+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yjgI]]&nbsp;&nbsp;


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Latest revision as of 21:40, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yjgI

Gene Synonym(s)

ECK4243, b4249, JW4207[1], JW4207, bcdA[2]

Product Desc.

predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain[3][4]

Putative oxidoreductase, function unknown[5]

Product Synonyms(s)

predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain[1], B4249[3][1], YjgI[3][1] , ECK4243, JW4207, b4249

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yjgI[3]

Regulation/Activity
Quick Links



        

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Notes

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The divergent YjgJ could be be a YjgI regulator.[5]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ Ma, Q et al. (2011) Engineering a novel c-di-GMP-binding protein for biofilm dispersal. Environ. Microbiol. 13 631-42 PubMed
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  5. ↑ 5.0 5.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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