ptrB:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''ptrB''  
''ptrB''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1846, b1845, JW1834, tlp''<ref name='LIB:Riley_2006'/>
''ECK1846, b1845, JW1834, tlp''<ref name='LIB:Riley_2006'/>, opdB, tlp''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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protease II<ref name='LIB:Riley_2006'/>, B1845<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tlp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PtrB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Oligopeptidase B<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''protease II<ref name='LIB:Riley_2006'/>, B1845<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tlp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PtrB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Oligopeptidase B<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1846, JW1834, opdB, tlp, b1845''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
<GO_nr />
* GO:0004175 endopeptidase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=ptrB&loc=MG1655:1926863..1924803,W3110:1930553..1928493,DH10B:2017434..2015374,REL606:1907415..1905355 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1907415&end=1905355&gene=ptrB&aa=mlpkaariphamtlhgdtridnyywlrddtrsqpevldylqqensyghrvmasqqalqdrilkeiidripqrevsapyikngyryrhiyepgceyaiyqrqsafseewdewetlldankraahsefysmggmaitpdntimalaedflsrrqygirfrnletgnwypelldnvepsfvwandswifyyvrkhpvtllpyqvwrhaigtpasqdkliyeekddtyyvslhkttskhyvvihlasattsevrlldaemadaepfvflprrkdheysldhyqhrfylrsnrhgknfglyrtrmrdeqqweelipprenimlegftlftdwlvveerqrgltslrqinrktrevigiafddpayvtwiaynpepetarlrygyssmttpdtlfeldmdtgerrvlkqtevpgfyaanyrsehlwivardgvevpvslvyhrkhfrkghnpllvygygsygasidadfsfsrlslldrgfvyaivhvrgggelgqqwyedgkflkkkntfndyldacdallklgygspslcyamggsaggmlmgvainqrpelfhgviaqvpfvdvvttmldesiplttgefeewgnpqdpqyyeymksyspydnvtaqayphllvttglhdsqvqywepakwvaklrelktddhllllctdmdsghggksgrfksyegvameyaflvalaqgtlpatpad Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ptrB+AND+escherichia+coli Pubmed(ptrB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ptrB Textpresso(ptrB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ptrB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11004]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000993&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ptrB&loc=MG1655%3A1926863..1924803,W3110%3A1930553..1928493,DH10B%3A2017434..2015374,REL606%3A1907415..1905355,BW2952%3A1816862..1818922]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1816862&end=1818922&gene=ptrB&aa=mlpkaariphamtlhgdtridnyywlrddtrsqpevldylqqensyghrvmasqqalqdrilkeiidripqrevsapyikngyryrhiyepgceyaiyqrqsafseewdewetlldankraahsefysmggmaitpdntimalaedflsrrqygirfrnletgnwypelldnvepsfvwandswifyyvrkhpvtllpyqvwrhaigtpasqdkliyeekddtyyvslhkttskhyvvihlasattsevrlldaemadaepfvflprrkdheysldhyqhrfylrsnrhgknfglyrtrmrdeqqweelipprenimlegftlftdwlvveerqrgltslrqinrktrevigiafddpayvtwiaynpepetarlrygyssmttpdtlfeldmdtgerrvlkqtevpgfyaanyrsehlwivardgvevpvslvyhrkhfrkghnpllvygygsygasidadfsfsrlslldrgfvyaivhvrgggelgqqwyedgkflkkkntfndyldacdallklgygspslcyamggsaggmlmgvainqrpelfhgviaqvpfvdvvttmldesiplttgefeewgnpqdpqyyeymksyspydnvtaqayphllvttglhdsqvqywepakwvaklrelktddhllllctdmdsghggksgrfksyegvameyaflvalaqgtlpatpad]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ptrB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ptrB]]&nbsp;&nbsp;


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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ptrB

Gene Synonym(s)

ECK1846, b1845, JW1834, tlp[1], opdB, tlp

Product Desc.

protease II[2][3]

Protease II; oligopeptidase B[4]

Product Synonyms(s)

protease II[1], B1845[2][1], Tlp[2][1], PtrB[2][1], Oligopeptidase B[2][1] , ECK1846, JW1834, opdB, tlp, b1845

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ptrB[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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Cleaves after Arg and Lys.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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