clcB:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''clcB''  
''clcB''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted voltage-gated chloride channel<ref name='LIB:Riley_2006'/>, B1592<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MriT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ClcB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YnfJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted voltage-gated chloride channel<ref name='LIB:Riley_2006'/>, B1592<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MriT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ClcB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YnfJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1587, JW5263, mriT, ynfJ, b1592''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=clcB&loc=MG1655:1663339..1664595,W3110:1667029..1668285,DH10B:1754300..1755556,REL606:1642510..1643766 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1642510&end=1643766&gene=clcB&aa=mfhcpfllmhhlhiypdlrtmfhrlliatvvgilaafavagfrhamlllewlflnndsgslvnaatnlspwrrlltpalgglaaglllmgwqkftqqrphaptdymealqtdgqfdyaaslvkslasllvvtsgsaigregamillaalaascfaqrftprqewklwiacgaaagmaaayraplagslfiaevlfgtmmlaslgpviisavvallvsnlinhsdallynvqlsvtvqardyaliistgvlaglcgpllltlmnachrgfvslklappwqlalgglivgllslftpavwgngystvqsfltappllmiiagiflcklcavlassgsgapggvftptlfiglaigmlygrslglwfpdgeeitlllgltgmatllaatthapimstlmicemtgeyqllpglliacviasvisrtlhrdsiyrqhtaqhs Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=clcB+AND+escherichia+coli Pubmed(clcB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=clcB Textpresso(clcB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=clcB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6850]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003439&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=clcB&loc=MG1655%3A1663339..1664595,W3110%3A1667029..1668285,DH10B%3A1754300..1755556,REL606%3A1642510..1643766,BW2952%3A1555398..1556654]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1555398&end=1556654&gene=clcB&aa=mfhcpfllmhhlhiypdlrtmfhrlliatvvgilaafavagfrhamlllewlflnndsgslvnaatnlspwrrlltpalgglaaglllmgwqkftqqrphaptdymealqtdgqfdyaaslvkslasllvvtsgsaigregamillaalaascfaqrftprqewklwiacgaaagmaaayraplagslfiaevlfgtmmlaslgpviisavvallvsnlinhsdallynvqlsvtvqardyaliistgvlaglcgpllltlmnachrgfvslklappwqlalgglivgllslftpavwgngystvqsfltappllmiiagiflcklcavlassgsgapggvftptlfiglaigmlygrslglwfpdgeeitlllgltgmatllaatthapimstlmicemtgeyqllpglliacviasvisrtlhrdsiyrqhtaqhs]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=clcB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=clcB]]&nbsp;&nbsp;


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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

clcB

Gene Synonym(s)

ECK1587, b1592, JW5263, mriT, ynfJ, yntJ[1]

Product Desc.

YnfJ chloride ion ClC transporter[2][3]

Voltage-gated ClC-type chloride channel; involved in the extreme acid response[4]

Product Synonyms(s)

predicted voltage-gated chloride channel[1], B1592[2][1], MriT[2][1], ClcB[2][1], YnfJ[2][1] , ECK1587, JW5263, mriT, ynfJ, b1592

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): clcB[2]

Regulation/Activity
Quick Links



        

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Notes

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ClcA and ClcB encode redundant chloride channels. single mutants have no phenotype.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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