intR:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''intR''  
''intR''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1342, b1345, JW1339, ydaP''<ref name='LIB:Riley_2006'/>
''ECK1342, b1345, JW1339, ydaP''<ref name='LIB:Riley_2006'/>, ydaP''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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Rac prophage; integrase<ref name='LIB:Riley_2006'/>, B1345<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdaP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IntR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''Rac prophage; integrase<ref name='LIB:Riley_2006'/>, B1345<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdaP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IntR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1342, JW1339, ydaP, b1345''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
<GO_nr />
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=intR&loc=MG1655:1411259..1410024,W3110:1414949..1413714,DH10B:1500655..1499420,REL606:1410405..1409170 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1410405&end=1409170&gene=intR&aa=msklptgveirgryiriwfmfrgkrcretlkgweitnsnikkagnlralivheinsgefeylrrfpqsstgakmvttrviktfgelcdiwtkiketelttntmkktksqlktlriiicestpishirysdilnyrnellhgetlyldnprsnkkgrtvrtvdnyiallcsllrfayqsgfistkpfegvkklqrnrikpdplsktefnalmesekgqsqnlwkfavysglrhgelaalawedvdlekgivnvrrnltildmfgppktnagirtvtllqpalealkeqykltghhrkseitfyhreygrtekqklhfvfmprvcngkqkpyysvsslgarwnaavkragirrrnpyhtrhtfacwlltaganpafiasqmghetaqmvyeiygmwiddmndeqiamlnarls Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=intR+AND+escherichia+coli Pubmed(intR)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=intR Textpresso(intR)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=intR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6676]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003271&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=intR&loc=MG1655%3A1411259..1410024,W3110%3A1414949..1413714,DH10B%3A1500655..1499420,REL606%3A1410405..1409170,BW2952%3A1302083..1303318]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1302083&end=1303318&gene=intR&aa=msklptgveirgryiriwfmfrgkrcretlkgweitnsnikkagnlralivheinsgefeylrrfpqsstgakmvttrviktfgelcdiwtkiketelttntmkktksqlktlriiicestpishirysdilnyrnellhgetlyldnprsnkkgrtvrtvdnyiallcsllrfayqsgfistkpfegvkklqrnrikpdplsktefnalmesekgqsqnlwkfavysglrhgelaalawedvdlekgivnvrrnltildmfgppktnagirtvtllqpalealkeqykltghhrkseitfyhreygrtekqklhfvfmprvcngkqkpyysvsslgarwnaavkragirrrnpyhtrhtfacwlltaganpafiasqmghetaqmvyeiygmwiddmndeqiamlnarls]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=intR+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=intR]]&nbsp;&nbsp;


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Latest revision as of 21:49, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

intR

Gene Synonym(s)

ECK1342, b1345, JW1339, ydaP[1], ydaP

Product Desc.

putative transposase[2][3]

Integrase gene, Rac prophage[4]

Product Synonyms(s)

Rac prophage; integrase[1], B1345[2][1], YdaP[2][1], IntR[2][1] , ECK1342, JW1339, ydaP, b1345

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): intR[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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