matA:Quickview: Difference between revisions

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|-
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''matA''  
''matA''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ykgK, ECK0293, b0294, JW5031''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>
''ykgK, ECK0293, b0294, JW5031''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>, JW5031''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted regulator<ref name='LIB:Riley_2006'/>, B0294<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YkgK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MatA<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/>  
''predicted regulator<ref name='LIB:Riley_2006'/>, B0294<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YkgK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MatA<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> , ECK0293, JW5031, ykgK, b0294''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=matA&loc=MG1655:310560..309970,W3110:310560..309970,DH10B:286110..285520 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=286110&end=285520&gene=matA&aa=mtwqsdysrdyevknhmecqnrsdkyiwsphdayfykglselivdidrliylslekirkdfvfinlstdslsefinrdnewlsavkgkqvvliaarksealanywyynsnirgvvyaglsrdirkelvyvingrflrkdikkdkitdremeiirmtaqgmqpksiariencsvktvythrrnaeaklyskiyklvq Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=matA+AND+escherichia+coli Pubmed(matA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=matA Textpresso(matA)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=matA&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=matA&loc=MG1655%3A310560..309970,W3110%3A310560..309970,DH10B%3A286110..285520]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=286110&end=285520&gene=matA&aa=mtwqsdysrdyevknhmecqnrsdkyiwsphdayfykglselivdidrliylslekirkdfvfinlstdslsefinrdnewlsavkgkqvvliaarksealanywyynsnirgvvyaglsrdirkelvyvingrflrkdikkdkitdremeiirmtaqgmqpksiariencsvktvythrrnaeaklyskiyklvq]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=matA+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=matA]]&nbsp;&nbsp;


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Latest revision as of 21:48, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

matA

Gene Synonym(s)

ykgK, ECK0293, b0294, JW5031[1][2], JW5031

Product Desc.

predicted regulator[3][2]

Putative transcriptional regulator for mat genes[4]

Product Synonyms(s)

predicted regulator[1], B0294[3][1], YkgK[3][1], MatA[2][1] , ECK0293, JW5031, ykgK, b0294

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ykgK[3]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


LuxR family. O18K1H7 matABC genes are required for Mat fimbria formation when cloned in K-12. matA mRNA was detected in K-12, but not matBC mRNA.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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