surE:Quickview: Difference between revisions
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{| | {| id="L49b0260cb2c04" class=" tableEdit New_Quickview_Table" | ||
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!align=left {{table_heading_style}} |Standard Name | !align=left {{table_heading_style}} |Standard Name | ||
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''surE'' | ''surE'' | ||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2739, b2744, JW2714, ygbC''<ref name='LIB:Riley_2006'/> | ''ECK2739, b2744, JW2714, ygbC''<ref name='LIB:Riley_2006'/>, ygbC'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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broad specificity 5'(3')-nucleotidase and polyphosphatase<ref name='LIB:Riley_2006'/>, B2744<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgbC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SurE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''broad specificity 5'(3')-nucleotidase and polyphosphatase<ref name='LIB:Riley_2006'/>, B2744<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgbC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SurE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2739, JW2714, ygbC, b2744'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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<GO_nr /> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://ecoliwiki.net/tools/display_dna.php?gene=surE&loc=MG1655 | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=surE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11817]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001750&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=surE&loc=MG1655%3A2868296..2867535,W3110%3A2868930..2868169,DH10B%3A2960838..2960077,REL606%3A2765135..2764374,BW2952%3A2753347..2754108]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2753347&end=2754108&gene=surE&aa=mrillsnddgvhapgiqtlakalrefadvqvvapdrnrsgasnsltlesslrtftfengdiavqmgtptdcvylgvnalmrprpdivvsginagpnlgddviysgtvaaamegrhlgfpalavsldghkhydtaaavtcsilralckeplrtgrilninvpdlpldqikgirvtrcgtrhpadqvipqqdprgntlywigppggkcdagpgtdfaavdegyvsitplhvdltahsaqdvvsdwlnsvgvgtqw]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=surE+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=surE]] | ||
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Latest revision as of 21:45, 27 May 2013
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
surE |
|---|---|
| Gene Synonym(s) |
ECK2739, b2744, JW2714, ygbC[1], ygbC |
| Product Desc. |
broad specificity 5'(3')-nucleotidase and polyphosphatase[2][3] Nucleotidase, 5- or 3'-monophosphates; purine, pyrimidine, ribo- and deoxyribonucleotides all effectively hydrolyzed; short chain exopolyphosphatase[4] |
| Product Synonyms(s) |
broad specificity 5'(3')-nucleotidase and polyphosphatase[1], B2744[2][1], YgbC[2][1], SurE[2][1] , ECK2739, JW2714, ygbC, b2744 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
A surE mutation is a specific suppressor of pcm stationary phase survival defects. The original surE mutant had a secondary rpoS mutation. The lack of survival in stationary phase was due to this cryptic rpoS mutation and clean surE mutants have no survival phenotype. SurE demonstrates nucleotidase preference for short chain substrates. otherPDB (T. maritima): 1J9J, 1J9K, 1J9L, 1ILV.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.