ybbC:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''ybbC''  
''ybbC''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0492, b0498, JW0487''<ref name='LIB:Riley_2006'/>
''ECK0492, b0498, JW0487''<ref name='LIB:Riley_2006'/>, JW0487''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted protein<ref name='LIB:Riley_2006'/>, B0498<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbbC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted protein<ref name='LIB:Riley_2006'/>, B0498<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbbC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0492, JW0487, b0498''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=ybbC&loc=MG1655:526805..527173,W3110:526805..527173,DH10B:466136..466504,REL606:499748..500116 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=499748&end=500116&gene=ybbC&aa=mkyssifsmlsffilfacnetavygsdeniifmryveklhldkysvkntvktetmaiqlaeiyvryrygeriaeeekpylitelpdswvvegaklpyevaggvfiieinkkngcvlnflhsk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybbC+AND+escherichia+coli Pubmed(ybbC)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ybbC Textpresso(ybbC)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ybbC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11769]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001705&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ybbC&loc=MG1655%3A526805..527173,W3110%3A526805..527173,DH10B%3A466136..466504,REL606%3A499748..500116,BW2952%3A429564..429932]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=429564&end=429932&gene=ybbC&aa=mkyssifsmlsffilfacnetavygsdeniifmryveklhldkysvkntvktetmaiqlaeiyvryrygeriaeeekpylitelpdswvvegaklpyevaggvfiieinkkngcvlnflhsk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybbC+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ybbC]]&nbsp;&nbsp;


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Latest revision as of 21:44, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ybbC

Gene Synonym(s)

ECK0492, b0498, JW0487[1], JW0487

Product Desc.

hypothetical protein[2]; predicted protein[3]

Function unknown, downstream of rhsD[4]

Product Synonyms(s)

predicted protein[1], B0498[2][1], YbbC[2][1] , ECK0492, JW0487, b0498

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rhsD[2]

Regulation/Activity
Quick Links



        

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Notes

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Probable false positive lipoprotein prediction, Cys not conserved. ybbC and yhhH are paralogs.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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