yedW:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yedW''  
''yedW''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1965, b1969, JW5322''<ref name='LIB:Riley_2006'/>
''ECK1965, b1969, JW5322''<ref name='LIB:Riley_2006'/>, JW5322''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted DNA-binding response regulator in two-component system with YedV<ref name='LIB:Riley_2006'/>, B1969<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YedW<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted DNA-binding response regulator in two-component system with YedV<ref name='LIB:Riley_2006'/>, B1969<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YedW<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1965, JW5322, b1969''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
<GO_nr />
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0016563 transcription activator activity ([http://www.geneontology.org/GO.evidence.shtml ISS])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=yedW&loc=MG1655:2036847..2036176,W3110:2040960..2040289,REL606:1976822..1976151,DH10B:2127855..2127184 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2127855&end=2127184&gene=yedW&aa=mnqavsitydlwhiifmkilliednqrtqewvtqglseagyvidavsdgrdglylalkddyaliildimlpgmdgwqilqtlrtakqtpvicltardsvddrvrgldsgandylvkpfsfsellarvraqlrqhhalnstleisglrmdsvshsvsrdnisitltrkefqllwllasrageiiprtviaseiwginfdsdtntvdvairrlrakvddpfpekliatirgmgysfvavkk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yedW+AND+escherichia+coli Pubmed(yedW)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yedW Textpresso(yedW)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yedW&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7057]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003643&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yedW&loc=MG1655%3A2036847..2036176,W3110%3A2040960..2040289,REL606%3A1976822..1976151,DH10B%3A2127855..2127184,BW2952%3A1928659..1929330]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1928659&end=1929330&gene=yedW&aa=mnqavsitydlwhiifmkilliednqrtqewvtqglseagyvidavsdgrdglylalkddyaliildimlpgmdgwqilqtlrtakqtpvicltardsvddrvrgldsgandylvkpfsfsellarvraqlrqhhalnstleisglrmdsvshsvsrdnisitltrkefqllwllasrageiiprtviaseiwginfdsdtntvdvairrlrakvddpfpekliatirgmgysfvavkk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yedW+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yedW]]&nbsp;&nbsp;


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Latest revision as of 21:42, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yedW

Gene Synonym(s)

ECK1965, b1969, JW5322[1], JW5322

Product Desc.

predicted DNA-binding response regulator in two-component system with YedV[2][3]

Putative response regulator, function unknown[4]

Product Synonyms(s)

predicted DNA-binding response regulator in two-component system with YedV[1], B1969[2][1], YedW[2][1] , ECK1965, JW5322, b1969

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yedV[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Part of putative two-component regulator system with response regulator YedV. AFMB Structural Genomics target No. 6 (http://afmb.cnrs-mrs.fr/article171.html)[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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