yfdR:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{| id="V49b02f6657ea4"  class=" tableEdit New_Quickview_Table"   
{|   id="V49b02f6657ea4"  class=" tableEdit New_Quickview_Table"   


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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yfdR''  
''yfdR''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2355, b2361, JW2358''<ref name='LIB:Riley_2006'/>
''ECK2355, b2361, JW2358''<ref name='LIB:Riley_2006'/>, JW2358''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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hypothetical protein<ref name='LIB:EcoCyc10.6'/>; CPS-53 (KpLE1) prophage; conserved protein<ref name='LIB:EcoCyc11.1'/>
hypothetical protein<ref name='LIB:EcoCyc10.6'/>; CPS-53 (KpLE1) prophage; conserved protein<ref name='LIB:EcoCyc11.1'/>
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Function unknown, CPS-53/KpLE1 prophage<ref name='LIB:EcoGene'/>
Function unknown, CPS-53/KpLE1 prophage<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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CPS-53 (KpLE1) prophage; conserved protein<ref name='LIB:Riley_2006'/>, B2361<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfdR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''CPS-53 (KpLE1) prophage; conserved protein<ref name='LIB:Riley_2006'/>, B2361<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfdR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2355, JW2358, b2361''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yfdR|yfdR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yfdR|yfdR]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yfdR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7230]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003805&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yfdR&loc=MG1655%3A2473006..2473542,W3110%3A2480430..2480966,DH10B%3A2564771..2565307,BW2952%3A2358811..2359347]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2358811&end=2359347&gene=yfdR&aa=mqriyvenkmsfiktfsgkhfyydkinkddivindiavslsnicrfaghlshfysvaqhavlcsqlvpqefafealmhdateaycqdipaplkrllpdykrmeekidavirekyglppvmstpvkyadlimlaterrdlglddgsfwpvlegipatemfnviplapghaygmfmerfndlselrkca]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yfdR+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yfdR]]&nbsp;&nbsp;


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Latest revision as of 21:42, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yfdR

Gene Synonym(s)

ECK2355, b2361, JW2358[1], JW2358

Product Desc.

hypothetical protein[2]; CPS-53 (KpLE1) prophage; conserved protein[3]

Function unknown, CPS-53/KpLE1 prophage[4]

Product Synonyms(s)

CPS-53 (KpLE1) prophage; conserved protein[1], B2361[2][1], YfdR[2][1] , ECK2355, JW2358, b2361

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yfdR[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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