elfA:Quickview: Difference between revisions

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{{Tab On|Quickview|ycbQ}}{{Tab|Gene|ycbQ}}{{Tab|Gene Product(s)|ycbQ}}{{Tab|Expression|ycbQ}}{{Tab|Evolution|ycbQ}}{{Tab|On One Page|ycbQ}}{{TabsBottom}}
{{Tab On|Quickview|elfA}}{{Tab|Gene|elfA}}{{Tab|Gene Product(s)|elfA}}{{Tab|Expression|elfA}}{{Tab|Evolution|elfA}}{{Tab|On One Page|elfA}}{{TabsBottom}}
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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''ycbQ''  
''elfA''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0929, b0938, JW5122''<ref name='LIB:Riley_2006'/>
''ycbQ, ECK0929, b0938, JW5122''<ref name='LIB:Riley_2006'/>, JW5122''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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predicted fimbrial-like adhesin protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
predicted fimbrial-like adhesin protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Function unknown, FimA homolog<ref name='LIB:EcoGene'/>
Function unknown, FimA homolog<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted fimbrial-like adhesin protein<ref name='LIB:Riley_2006'/>, B0938<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcbQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted fimbrial-like adhesin protein<ref name='LIB:Riley_2006'/>, B0938<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcbQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0929, JW5122, ycbQ, b0938''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ycbQ|ycbQ]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ycbQ|ycbQ]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=elfA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6480]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003080&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=elfA&loc=MG1655%3A997091..997630,W3110%3A998290..998829,DH10B%3A1051019..1051558,REL606%3A1014959..1015498,BW2952%3A900059..900598]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=900059&end=900598&gene=elfA&aa=mitmkksvltafitvvcatssvmaaddnaitdgsvtfngkviapactlvaatkdsvvtlpdvsatklqtngqvsgvqidvpielkdcdttvtknatftfngtadttqitafanqassdaatnvalqmymndgttaitpdtetgnillqdgdqtltfkvdyiatgkatsgnvnavtnfhinyy]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=elfA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=elfA]]&nbsp;&nbsp;


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Latest revision as of 21:44, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

elfA

Gene Synonym(s)

ycbQ, ECK0929, b0938, JW5122[1], JW5122

Product Desc.

predicted fimbrial-like adhesin protein[2][3]

Function unknown, FimA homolog[4]

Product Synonyms(s)

predicted fimbrial-like adhesin protein[1], B0938[2][1], YcbQ[2][1] , ECK0929, JW5122, ycbQ, b0938

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ycbQ[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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One of 25 FimA homologs in EcoGene. First 22 aa are predicted to be a type I signal peptide.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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