paoA:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
touch |
||
| (10 intermediate revisions by the same user not shown) | |||
| Line 10: | Line 10: | ||
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css> | -->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css> | ||
<noinclude>{{TabsTop}} | <noinclude>{{TabsTop}} | ||
{{Tab On|Quickview| | {{Tab On|Quickview|paoA}}{{Tab|Gene|paoA}}{{Tab|Gene Product(s)|paoA}}{{Tab|Expression|paoA}}{{Tab|Evolution|paoA}}{{Tab|On One Page|paoA}}{{TabsBottom}} | ||
{| | {| | ||
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;" | |- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;" | ||
| Line 23: | Line 23: | ||
* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
* | * | ||
****************************************************************************************** --> | ****************************************************************************************** --> | ||
{| | {| id="A49b02962c55b2" class=" tableEdit New_Quickview_Table" | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
'' | ''paoA'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK0285, b0286, JW0280''<ref name='LIB:Riley_2006'/> | ''ECK0285, b0286, JW0280'', yagT<ref name='LIB:Riley_2006'/>, JW0280, yagT'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
putative oxidoreductase, Fe-S subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | putative oxidoreductase, Fe-S subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
| Line 41: | Line 41: | ||
Putative iron-sulfur binding protein, function unknown; possible subunit of a putative periplasmic YagRST xanthine dehydrogenase homolog<ref name='LIB:EcoGene'/> | Putative iron-sulfur binding protein, function unknown; possible subunit of a putative periplasmic YagRST xanthine dehydrogenase homolog<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
predicted xanthine dehydrogenase, 2Fe-2S subunit<ref name='LIB:Riley_2006'/>, B0286<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, | ''predicted xanthine dehydrogenase, 2Fe-2S subunit<ref name='LIB:Riley_2006'/>, B0286<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PaoA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0285, JW0280, yagT, b0286'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | |||
<GO_nr /> | |||
|- | |||
!align=left {{table_heading_style}} |Knock-Out Phenotype | |||
|| | || | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Expression | ||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:yagQ|yagQ]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yagQ|yagQ]]<ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yagT&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yagT&loc=MG1655%3A301797..301108,W3110%3A301797..301108,DH10B%3A277347..276658,REL606%3A272757..272068]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=272757&end=272068&gene=yagT&aa=msnqgeypednrvgkhephdlsltrrdlikvsaataatavvyphstlaasvpaatpapeimpltlkvngkteqlevdtrttlldtlrenlhligtkkgcdhgqcgactvlvngrrlnacltlavmhqgaeittieglgspdnlhpmqaafikhdgfqcgyctsgqicssvavlkeiqdgipshvtvdlvsapettadeirermsgnicrcgayanilaaiedaageiks]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yagT+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yagT]] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Latest revision as of 21:44, 27 May 2013
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
paoA |
|---|---|
| Gene Synonym(s) |
ECK0285, b0286, JW0280, yagT[1], JW0280, yagT |
| Product Desc. |
putative oxidoreductase, Fe-S subunit[2][3] Putative iron-sulfur binding protein, function unknown; possible subunit of a putative periplasmic YagRST xanthine dehydrogenase homolog[4] |
| Product Synonyms(s) |
predicted xanthine dehydrogenase, 2Fe-2S subunit[1], B0286[2][1], PaoA[2][1] , ECK0285, JW0280, yagT, b0286 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Verified Tat substrate: YagT has a predicted Tat-only (Class I) 49 aa signal peptide (Tullman-Ercek, 2007). The internal TTG at codon 23 could alternatively be utilized to make a protein with a predicted 26 aa signal peptide.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.