rfaI:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01501 PFAM:PF01501]
[http://pfam.janelia.org/family/PF01501 PF01501 Glycosyl transferase family 8]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=53448 SUPERFAMILY:53448]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13778:SF1 PTHR13778:SF1]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF08437 PF08437  Glycosyl transferase family 8 C-terminal]
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[[EcoCyc]]
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EcoCyc:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:36, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT3G06260 (score: 1.000; bootstrap: 100%)
  • AT1G13250 (score: 0.570)
  • AT4G02130 (score: 0.528)
  • AT3G28340 (score: 0.520)
  • AT1G70090 (score: 0.517)
  • AT3G62660 (score: 0.516)
  • AT1G24170 (score: 0.511)
  • AT1G02720 (score: 0.499)
  • AT1G19300 (score: 0.498)
  • AT3G50760 (score: 0.489)
  • AT3G02350 (score: 0.064)
  • AT3G25140 (score: 0.061)
  • AT5G54690 (score: 0.055)
  • AT2G20810 (score: 0.052)
  • AT3G58790 (score: 0.051)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00009178 (score: 1.000; bootstrap: 100%)
  • WBGene00018604 (score: 0.340)

From Inparanoid:20070104

Shigella flexneri

WAAL

From SHIGELLACYC

E. coli O157

WAAI

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01501 Glycosyl transferase family 8

Superfamily (EcoliWiki Page)

SUPERFAMILY:53448

Panther (EcoliWiki Page)

PTHR13778:SF1

Pfam (EcoliWiki Page)

PF08437 Glycosyl transferase family 8 C-terminal

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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