rbn:Quickview: Difference between revisions
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{| | {| id="X49b021b4777e1" class=" tableEdit New_Quickview_Table" | ||
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rbn'' | ''rbn'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''elaC, ECK2262, b2268, JW2263, ecoZ, rnz, zipD''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/> | ''elaC, ECK2262, b2268, JW2263, ecoZ, rnz, zipD''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>, zipD'' | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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ElaC<ref name='LIB:EcoCyc10.6'/>; Rbn<ref name='LIB:EcoCyc11.1'/>; | ElaC<ref name='LIB:EcoCyc10.6'/>; Rbn<ref name='LIB:EcoCyc11.1'/>; | ||
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RNase BN, tRNA processing enzyme; has zinc phosphodiesterase activity<ref name='LIB:EcoGene'/> | RNase BN, tRNA processing enzyme; has zinc phosphodiesterase activity<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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binuclear zinc phosphodiesterase<ref name='LIB:Riley_2006'/>, ZipD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rnz<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B2268<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EcoZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ElaC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''binuclear zinc phosphodiesterase<ref name='LIB:Riley_2006'/>, ZipD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rnz<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B2268<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EcoZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ElaC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2262, ecoZ, elaC, JW2263, rnz, zipD, b2268'' | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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<GO_nr /> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | |||
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!align=left | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:elaC|elaC]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:elaC|elaC]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rbn&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7175]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003751&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rbn&loc=MG1655%3A2379630..2380547,W3110%3A2386278..2387195,DH10B%3A4173866..4174738,BW2952%3A2265435..2266352]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2265435&end=2266352&gene=rbn&aa=mkrdelmeliflgtsagvptrtrnvtaillnlqhptqsglwlfdcgegtqhqllhtafnpgkldkifishlhgdhlfglpgllcsrsmsgiiqpltiygpqgirefvetalrisgswtdypleiveigageilddglrkvtayplehplecygyrieehdkpgalnaqalkaagvppgplfqelkagktitledgrqingadylaapvpgkalaifgdtgpcdaaldlakgvdvmvheatlditmeakansrghsstrqaatlareagvgkliithvssryddkgcqhllrecrsifpatelandftvfnv]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rbn+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rbn]] | |||
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Latest revision as of 21:54, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
rbn |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
RNase BN, tRNA processing enzyme; has zinc phosphodiesterase activity[4] |
| Product Synonyms(s) |
binuclear zinc phosphodiesterase[1], ZipD[3][1], Rnz[3][1], B2268[3][1], EcoZ[3][1], ElaC[3][1] , ECK2262, ecoZ, elaC, JW2263, rnz, zipD, b2268 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
elaC is renamed rbn. The elaABCD genes are named, without a phenotypic explanation, in Genbank U58768. yihY was previously thought to be rbn. rbn is an essential gene [not clear this is correct]. Schilling, et al. Biochem Biophys Res Commun. 2004 Aug 6;320(4):1365-73. has erratum in Biochem Biophys Res Commun. 2005 Feb 4;327(1):371.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.