rbfA:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''rbfA''  
''rbfA''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3156, b3167, JW3136, yhbB, P15b, sdr-43''<ref name='LIB:Riley_2006'/>
''ECK3156, b3167, JW3136, yhbB, P15b, sdr-43''<ref name='LIB:Riley_2006'/>, sdr-43''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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30S ribosome binding factor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
30S ribosome binding factor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Ribosome binding factor required for efficient processing of 16s rRNA; cold-shock adaptation protein; overexpression suppresses cold-sensitive 16S rRNA<ref name='LIB:EcoGene'/>
Ribosome binding factor required for efficient processing of 16s rRNA; cold-shock adaptation protein; overexpression suppresses cold-sensitive 16S rRNA<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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30s ribosome binding factor<ref name='LIB:Riley_2006'/>, B3167<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RbfA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''30s ribosome binding factor<ref name='LIB:Riley_2006'/>, B3167<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RbfA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3156, JW3136, sdr-43, yhbB, b3167''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp|metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp|metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rbfA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11178]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001160&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rbfA&loc=MG1655%3A3311200..3310799,W3110%3A3313033..3312632,REL606%3A3248412..3248011,DH10B%3A3408945..3408544,BW2952%3A3197947..3198348]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3197947&end=3198348&gene=rbfA&aa=makefgrpqrvaqemqkeialilqreikdprlgmmttvsgvemsrdlayakvyvtflndkdedavkagikalqeasgfirsllgkamrlrivpeltffydnslvegmrmsnlvtsvvkhdeerrvnpddsked]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rbfA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rbfA]]&nbsp;&nbsp;


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Latest revision as of 21:54, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rbfA

Gene Synonym(s)

ECK3156, b3167, JW3136, yhbB, P15b, sdr-43[1], sdr-43

Product Desc.

30S ribosome binding factor[2][3]

Ribosome binding factor required for efficient processing of 16s rRNA; cold-shock adaptation protein; overexpression suppresses cold-sensitive 16S rRNA[4]

Product Synonyms(s)

30s ribosome binding factor[1], B3167[2][1], YhbB[2][1], RbfA[2][1] , ECK3156, JW3136, sdr-43, yhbB, b3167

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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