hyfR:Quickview: Difference between revisions

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{{Tab On|Quickview|hyfR}}{{Tab|Gene|hyfR}}{{Tab|Gene Product(s)|hyfR}}{{Tab|Expression|hyfR}}{{Tab|Evolution|hyfR}}{{Tab|On One Page|hyfR}}{{TabsBottom}}
{{Tab On|Quickview|hyfR}}{{Tab|Gene|hyfR}}{{Tab|Gene Product(s)|hyfR}}{{Tab|Expression|hyfR}}{{Tab|Evolution|hyfR}}{{Tab|On One Page|hyfR}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[hyfR:Gene|''hyfR]]'' (synonyms: ''ECK2487, b2491, JW2476'')<ref name='LIB:Riley_2006'/>
''hyfR''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[hyfR:Gene_Product(s)|HyfR product]]<ref name='LIB:Riley_2006'/>: DNA-binding transcriptional activator, formate sensing<ref name='LIB:Riley_2006'/>, B2491<ref name='LIB:EcoCyc10.6'/>, HyfR<ref name='LIB:EcoCyc10.6'/>
''ECK2487, b2491, JW2476''<ref name='LIB:Riley_2006'/>, JW2476''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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HyfR transcriptional activator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
HyfR transcriptional activator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


 
Formate-sensing regulator for hyf operon<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA-binding transcriptional activator, formate sensing<ref name='LIB:Riley_2006'/>, B2491<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HyfR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2487, JW2476, b2491''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:hyfABCDEFGHIJR-focB|hyfABCDEFGHIJR-focB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:hyfABCDEFGHIJR-focB|hyfABCDEFGHIJR-focB]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=hyfR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7308]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003880&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=hyfR&loc=MG1655%3A2609922..2611934,W3110%3A2610556..2612568,REL606%3A2532726..2534732,DH10B%3A2701687..2703699,BW2952%3A2495727..2497739]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2495727&end=2497739&gene=hyfR&aa=mfappqgitieavngmlaerlaqkhgkasllrafiplpppfspvqlielhvlksnfyyryhddgsdvtatteyqgemvdysrhavllgssgmaelrfirthgsrftsqdctlfnwlariitpvlqswlndeeqqvalrllekdrdhhrvlvditnavlshldlddliadvareihhffglasvsmvlgdhrknekfslwcsdlsashcaclprcmpgesvlltqtlqtrqptlthraddlflwqrdplllllasngcesallipltfgnhtpgalllahtsstlfseencqllqhiadriaiavgnadawrsmtdlqeslqqenhqlseqllsnlgigdiiyqsqamedllqqvdivaksdstvlicgetgtgkeviaraihqlsprrdkplvkincaaipaslleselfghdkgaftgainthrgrfeiadggtlfldeigdlplelqpkllrvlqereierlggsrtipvnvrviaatnrdlwqmvedrqfrsdlfyrlnvfplelpplrdrpedipllakhftqkmarhmnraidaiptealrqlmswdwpgnvrelenvieravlltrgnslnlhlnvrqsrllptlnedsalrssmaqllhpttpendeeerqrivqvlretngivagprgaatrlgmkrttllsrmqrlgisvrevl]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hyfR+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=hyfR]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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Latest revision as of 21:49, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

hyfR

Gene Synonym(s)

ECK2487, b2491, JW2476[1], JW2476

Product Desc.

HyfR transcriptional activator[2][3]

Formate-sensing regulator for hyf operon[4]

Product Synonyms(s)

DNA-binding transcriptional activator, formate sensing[1], B2491[2][1], HyfR[2][1] , ECK2487, JW2476, b2491

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): hyfABCDEFGHIJR-focB[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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