prpR:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''prpR''  
''prpR''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0328, b0330, JW0322, yahP''<ref name='LIB:Riley_2006'/>
''ECK0328, b0330, JW0322, yahP''<ref name='LIB:Riley_2006'/>, yahP''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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PrpR transcriptional regulator<ref name='LIB:EcoCyc10.6'/>; PrpR transcriptional dual regulator<ref name='LIB:EcoCyc11.1'/>
PrpR transcriptional regulator<ref name='LIB:EcoCyc10.6'/>; PrpR transcriptional dual regulator<ref name='LIB:EcoCyc11.1'/>
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Transcriptional regulator of prp operon; propionate catabolism via 2-methlycitrate cycle, characterized primarily in Salmonella<ref name='LIB:EcoGene'/>
Transcriptional regulator of prp operon; propionate catabolism via 2-methlycitrate cycle, characterized primarily in Salmonella<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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DNA-binding transcriptional activator<ref name='LIB:Riley_2006'/>, B0330<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YahP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PrpR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''DNA-binding transcriptional activator<ref name='LIB:Riley_2006'/>, B0330<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YahP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PrpR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0328, JW0322, yahP, b0330''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:prpR|prpR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:prpR|prpR]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=prpR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6195]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002813&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=prpR&loc=MG1655%3A347667..346081,W3110%3A347667..346081,REL606%3A321093..319507]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=321093&end=319507&gene=prpR&aa=mahpprlnddkpviwtvsvtrlfelfrdislefdhlanitpiqlgfekavtyirkklanercdaiiaagsngaylksrlsvpvilikpsgydvlqalakagkltssigvvtyqetipalvafqktfnlrldqrsyiteedargqinelkangteavvgaglitdlaeeagmtgifiysaatvrqafsdaldmtrmslrhnthdatrnalrtryvlgdmlgqspqmeqvrqtillyarssaavliegetgtgkelaaqaihreyfarhdarqgkkshpfvavncgaiaeslleaelfgyeegaftgsrrggraglfeiahggtlfldeigemplplqtrllrvleekevtrvgghqpvpvdvrvisathcnleedmqqgrfrrdlfyrlsilrlqlpplrervadilplaesflkvslaalsapfsaalrqglqasetvllhydwpgnirelrnmmerlalflsveptpdltpqfmqlllpelaresaktpaprlltpqqalekfngdktaaanylgisrttfwrrlks]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=prpR+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=prpR]]&nbsp;&nbsp;


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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

prpR

Gene Synonym(s)

ECK0328, b0330, JW0322, yahP[1], yahP

Product Desc.

PrpR transcriptional regulator[2]; PrpR transcriptional dual regulator[3]

Transcriptional regulator of prp operon; propionate catabolism via 2-methlycitrate cycle, characterized primarily in Salmonella[4]

Product Synonyms(s)

DNA-binding transcriptional activator[1], B0330[2][1], YahP[2][1], PrpR[2][1] , ECK0328, JW0322, yahP, b0330

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): prpR[2]

Regulation/Activity
Quick Links



        

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Notes

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Crp regulon.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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