visC:Quickview: Difference between revisions
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* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
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{| id="Z49b0284586752" class=" tableEdit New_Quickview_Table" | {| id="Z49b0284586752" class=" tableEdit New_Quickview_Table" | ||
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!align=left {{table_heading_style}} |Standard Name | !align=left {{table_heading_style}} |Standard Name | ||
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''visC'' | ''ubiI'' <ref name='PMID:23709220'/> (formerly ''visC'') | ||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2901, b2906, JW2874''<ref name='LIB:Riley_2006'/> | ''ECK2901, b2906, JW2874''<ref name='LIB:Riley_2006'/>, ''visC'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted oxidoreductase with FAD/NAD(P)-binding domain<ref name='LIB:Riley_2006'/>, B2906<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, VisC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''predicted oxidoreductase with FAD/NAD(P)-binding domain<ref name='LIB:Riley_2006'/>, B2906<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, VisC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2901, JW2874, b2906'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://porteco.org/AjaxSearch.jsp?searchString=visC&s=search | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=visC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11333]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001304&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=visC&loc=MG1655%3A3050339..3049137,W3110%3A3050973..3049771,REL606%3A2938068..2936866,DH10B%3A3144209..3143007,BW2952%3A2936285..2937487]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2936285&end=2937487&gene=visC&aa=mqsvdvaivgggmvglavacglqgsglrvavleqrvqeplaanappqlrvsainaaseklltrlgvwqdilsrrascyhgmevwdkdsfghisfddqsmgyshlghivensvihyalwnkahqssditllapaelqqvawgenetfltlkdgsmltarlvigadganswlrnkadipltfwdyqhhalvatirteephdavarqvfhgegilaflplsdphlcsivwslspeeaqrmqqasedefnralniafdnrlglckvesarqvfpltgryarqfashrlalvgdaahtihplagqgvnlgfmdaaeliaelkrlhrqgkdigqyiylrryersrkhsaalmlagmqgfrdlfsgtnpakkllrdiglkladtlpgvkpqlirqamglndlpewlr]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=visC+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=visC]] | ||
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|< | |<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.7564.Z49b0284586752&page=7564&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</div> || | ||
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Latest revision as of 18:41, 28 April 2017
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
ubiI [1] (formerly visC) |
|---|---|
| Gene Synonym(s) |
ECK2901, b2906, JW2874[2], visC |
| Product Desc. |
predicted oxidoreductase, FAD/NAD(P)-binding domain[3][4] Putative FAD-dependent oxidoreductase, function unknown; downstream of and homologous to ubiH (visB)[5] |
| Product Synonyms(s) |
predicted oxidoreductase with FAD/NAD(P)-binding domain[2], B2906[3][2], VisC[3][2] , ECK2901, JW2874, b2906 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
See Help:Quickview for help with entering information in the Quickview table.
Notes
A deletion of visC has no effect on photosensitivity or aerobic respiration (Nakahigashi, 1992). visC, ubiH, ubiF and mhpA are paralogs. Probable false positive lipoprotein prediction, Cys not conserved.[5]
References
- ↑ Hajj Chehade, M et al. (2013) ubiI, a new gene in Escherichia coli coenzyme Q biosynthesis, is involved in aerobic C5-hydroxylation. J. Biol. Chem. 288 20085-92 PubMed
- ↑ 2.0 2.1 2.2 2.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 5.0 5.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.