hemA:Evolution: Difference between revisions

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m 127.0.0.1 moved page gtrA:Evolution to hemA:Evolution over redirect: Correct bad gene renaming from 2011
 
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF05201 PFAM:PF05201]
[http://pfam.janelia.org/family/PF00745 PF00745  Glutamyl-tRNAGlu reductase, dimerisation domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF05201 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=69742 SUPERFAMILY:69742]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01488 PF01488  Shikimate / quinate 5-dehydrogenase]
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[[EcoCyc]]
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EcoCyc:EG10427
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10427
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000420
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0422
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0004064
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 20:10, 13 July 2015

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT1G58290 (score: 1.000; bootstrap: 100%)
  • AT1G09940 (score: 0.736)
  • AT2G31250 (score: 0.510)

From Inparanoid:20070104

Oryza gramene

  • O48674 (score: 1.000; bootstrap: 100%)
  • Q9FW00 (score: 0.964)
  • Q53X37 (score: 0.865)
  • Q42843 (score: 0.865)
  • O65796 (score: 0.819)
  • Q96563 (score: 0.777)
  • Q9FYS1 (score: 0.429)
  • Q9FYS2 (score: 0.246)

From Inparanoid:20070104

Shigella flexneri

HEMA

From SHIGELLACYC

E. coli O157

HEMA

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain

Pfam (EcoliWiki Page)

PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:51735

Panther (EcoliWiki Page)

PTHR13812:SF12

Superfamily (EcoliWiki Page)

SUPERFAMILY:69075

Superfamily (EcoliWiki Page)

SUPERFAMILY:69742

Pfam (EcoliWiki Page)

PF01488 Shikimate / quinate 5-dehydrogenase

EcoCyc

EcoCyc:EG10427

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10427

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000420

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0422

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004064

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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