PMID:17244358: Difference between revisions
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''' | '''Carmack, CS, McCue, LA, Newberg, LA and Lawrence, CE''' (2007) PhyloScan: identification of transcription factor binding sites using cross-species evidence. ''Algorithms Mol Biol'' '''2''':1 | ||
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!align=left |Abstract | !align=left |Abstract | ||
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==Annotations {{HelpIcon|Help:Literature}}== | ==Annotations {{HelpIcon|Help:Literature}}== | ||
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==EcoliWiki Links {{HelpIcon|Help:Literature}} == | ==EcoliWiki Links {{HelpIcon|Help:Literature}} == | ||
Latest revision as of 04:31, 15 September 2013
| Citation |
Carmack, CS, McCue, LA, Newberg, LA and Lawrence, CE (2007) PhyloScan: identification of transcription factor binding sites using cross-species evidence. Algorithms Mol Biol 2:1 |
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| Abstract |
When transcription factor binding sites are known for a particular transcription factor, it is possible to construct a motif model that can be used to scan sequences for additional sites. However, few statistically significant sites are revealed when a transcription factor binding site motif model is used to scan a genome-scale database. |
| Links |
PubMed PMC1794230 Online version:10.1186/1748-7188-2-1 |
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Significance
You can scan for transcription factor binding sites in E. coli using the associated PhyloScan web server.
Useful Materials and Methods
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See also
References
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