metB:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''metB''  
''metB''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3931, b3939, JW3910, met-1''<ref name='LIB:Riley_2006'/>
''ECK3931, b3939, JW3910, met-1''<ref name='LIB:Riley_2006'/>, met-1''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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cystathionine gamma-synthase, PLP-dependent<ref name='LIB:Riley_2006'/>, B3939<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MetB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''cystathionine gamma-synthase, PLP-dependent<ref name='LIB:Riley_2006'/>, B3939<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MetB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3931, JW3910, met-1, b3939''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
<GO_nr />
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=metB&loc=MG1655:4126695..4127855,W3110:3508009..3506849,REL606:4108779..4109939,DH10B:4226392..4227552 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4226392&end=4227552&gene=metB&aa=mtrkqatiavrsglnddeqygcvvppihlsstynftgfneprahdysrrgnptrdvvqralaeleggagavltntgmsaihlvttvflkpgdllvaphdcyggsyrlfdslakrgcyrvlfvdqgdeqalraalaekpklvlvespsnpllrvvdiakichlarevgavsvvdntflspalqnplalgadlvlhsctkylnghsdvvagvviakdpdvvtelawwannigvtggafdsylllrglrtlvprmelaqrnaqaivkylqtqplvkklyhpslpenqgheiaarqqkgfgamlsfeldgdeqtlrrflgglslftlaeslggveslishaatmthagmapearaaagisetllristgiedgedliadlengfraankg Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=metB+AND+escherichia+coli Pubmed(metB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=metB Textpresso(metB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=metB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10582]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000575&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=metB&loc=MG1655%3A4126695..4127855,W3110%3A3508009..3506849,REL606%3A4108779..4109939,DH10B%3A4226392..4227552,BW2952%3A4016364..4017524]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4016364&end=4017524&gene=metB&aa=mtrkqatiavrsglnddeqygcvvppihlsstynftgfneprahdysrrgnptrdvvqralaeleggagavltntgmsaihlvttvflkpgdllvaphdcyggsyrlfdslakrgcyrvlfvdqgdeqalraalaekpklvlvespsnpllrvvdiakichlarevgavsvvdntflspalqnplalgadlvlhsctkylnghsdvvagvviakdpdvvtelawwannigvtggafdsylllrglrtlvprmelaqrnaqaivkylqtqplvkklyhpslpenqgheiaarqqkgfgamlsfeldgdeqtlrrflgglslftlaeslggveslishaatmthagmapearaaagisetllristgiedgedliadlengfraankg]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=metB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=metB]]&nbsp;&nbsp;


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Latest revision as of 21:56, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

metB

Gene Synonym(s)

ECK3931, b3939, JW3910, met-1[1], met-1

Product Desc.

MetB[2][3];

Component of O-SUCCHOMOSERLYASE-CPLX[2]

Cystathionine gamma-synthase; homotetrameric[4]

Product Synonyms(s)

cystathionine gamma-synthase, PLP-dependent[1], B3939[2][1], MetB[2][1] , ECK3931, JW3910, met-1, b3939

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): metBL[2]

Regulation/Activity
Quick Links



        

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Notes

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Upregulated by GSNO in defined medium.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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