araJ:Quickview: Difference between revisions

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{|   id="K49aee0182e166"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[araJ:Gene|''araJ]]'' (synonyms: ''ECK0390, b0396, JW0386, araT'')<ref name='LIB:Riley_2006'/>
''araJ''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[araJ:Gene_Product(s)|AraJ product]]<ref name='LIB:Riley_2006'/>: predicted transporter product, B0396 product, AraT product
''ECK0390, b0396, JW0386, araT''<ref name='LIB:Riley_2006'/>
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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AraJ MFS transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
AraJ MFS transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Function unknown, arabinose inducible; not involved in arabinose uptake or utilization; possible arabinose exporter<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted transporter<ref name='LIB:Riley_2006'/>, B0396<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AraT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AraJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0390, JW0386, b0396''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:araJ|araJ]]<ref name='LIB:EcoCyc10.6'/>, OP00139  
transcription unit(s): [[:Category:Txn_unit:araJ|araJ]]<ref name='LIB:EcoCyc10.6'/>, OP00139  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=araJ&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10060]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000056&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=araJ&loc=MG1655%3A411705..410521,W3110%3A411705..410521,DH10B%3A351036..349852,REL606%3A380904..379720,BW2952%3A313280..314464]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=313280&end=314464&gene=araJ&aa=mkkvilslalgtfglgmaefgimgvltelahnvgisipaaghmisyyalgvvvgapiialfssryslkhillflvalcvignamftlsssylmlaigrlvsgfphgaffgvgaivlskiikpgkvtaavagmvsgmtvanllgiplgtylsqefswrytflliavfniavmasvyfwvpdirdeakgnlreqfhflrspapwlifaatmfgnagvfawfsyvkpymmfisgfsetamtfimmlvglgmvlgnmlsgrisgrysplriaavtdfiivlallmlffcggmkttslifaficcaglfalsaplqilllqnakggellgaaggqiafnlgsavgaycggmmltlglaynyvalpaallsfaamsslllygrykrqqaadtpvlakplg]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=araJ+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=araJ]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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Major Facilitator Superfamily (MFS). Ara regulon.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

araJ

Gene Synonym(s)

ECK0390, b0396, JW0386, araT[1]

Product Desc.

AraJ MFS transporter[2][3]

Function unknown, arabinose inducible; not involved in arabinose uptake or utilization; possible arabinose exporter[4]

Product Synonyms(s)

predicted transporter[1], B0396[2][1], AraT[2][1], AraJ[2][1] , ECK0390, JW0386, b0396

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): araJ[2], OP00139

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Major Facilitator Superfamily (MFS). Ara regulon.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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