cmoB:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''yecP, ECK1872, b1871, JW1860''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>
''yecP, ECK1872, b1871, JW1860''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>, JW1860''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted S-adenosyl-L-methionine-dependent methyltransferase<ref name='LIB:Riley_2006'/>, B1871<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YecP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CmoB<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/>  
''predicted S-adenosyl-L-methionine-dependent methyltransferase<ref name='LIB:Riley_2006'/>, B1871<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YecP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CmoB<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> , ECK1872, JW1860, yecP, b1871''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=cmoB&s=search PortEco search(cmoB)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=cmoB&loc=MG1655:1951466..1952437,W3110:1955156..1956127,REL606:1932212..1933183,BW2952:1843525..1844496 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1843525&end=1844496&gene=cmoB&aa=midfgnfysliaknhlshwletlpaqianwqreqqhglfkqwsnaveflpeikpyrldllhsvtaeseeplsagqikrietlmrnlmpwrkgpfslygvnidtewrsdwkwdrvlphlsdltgrtildvgcgsgyhmwrmigagahlavgidptqlflcqfeavrkllgndqrahllplgieqlpalkafdtvfsmgvlyhrrsplehlwqlkdqlvnegelvletlvidgdentvlvpgdryaqmrnvyfipsalalknwlkkcgfvdiriadvsvttteeqrrtewmvtesladfldphdpgktvegypapkravliarkp Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cmoB+AND+escherichia+coli Pubmed(cmoB)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cmoB Textpresso(cmoB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=cmoB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7021]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003608&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=cmoB&loc=MG1655%3A1951466..1952437,W3110%3A1955156..1956127,REL606%3A1932212..1933183,BW2952%3A1843525..1844496]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1843525&end=1844496&gene=cmoB&aa=midfgnfysliaknhlshwletlpaqianwqreqqhglfkqwsnaveflpeikpyrldllhsvtaeseeplsagqikrietlmrnlmpwrkgpfslygvnidtewrsdwkwdrvlphlsdltgrtildvgcgsgyhmwrmigagahlavgidptqlflcqfeavrkllgndqrahllplgieqlpalkafdtvfsmgvlyhrrsplehlwqlkdqlvnegelvletlvidgdentvlvpgdryaqmrnvyfipsalalknwlkkcgfvdiriadvsvttteeqrrtewmvtesladfldphdpgktvegypapkravliarkp]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cmoB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cmoB]]&nbsp;&nbsp;


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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

cmoB

Gene Synonym(s)

yecP, ECK1872, b1871, JW1860[1][2], JW1860

Product Desc.

putative enzyme[3]; predicted S-adenosyl-L-methionine-dependent methyltransferase[2]

tRNA(mo5U34)methyltransferase, SAM-dependent[4]

Product Synonyms(s)

predicted S-adenosyl-L-methionine-dependent methyltransferase[1], B1871[3][1], YecP[3][1], CmoB[2][1] , ECK1872, JW1860, yecP, b1871

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yecN[3]

Regulation/Activity
Quick Links



        

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Notes

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CmoB catalyzes an intermediate step in tRNA(cmo5U34) synthesis that forms uridine-5-oxyacetic acid (cmo5U) in tRNA. The cmoB ortholog is functionally characterized in S. typhimurium.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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