ispF:Quickview: Difference between revisions

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{{Tab On|Quickview|ispF}}{{Tab|Gene|ispF}}{{Tab|Gene Product(s)|ispF}}{{Tab|Expression|ispF}}{{Tab|Evolution|ispF}}{{Tab|On One Page|ispF}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ispF:Gene|''ispF]]'' (synonyms: ''ECK2741, b2746, JW2716, ygbB'')<ref name='LIB:Riley_2006'/>
''ispF''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ispF:Gene_Product(s)|IspF product]]<ref name='LIB:Riley_2006'/>: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase<ref name='LIB:Riley_2006'/>, B2746<ref name='LIB:EcoCyc10.6'/>, YgbB<ref name='LIB:EcoCyc10.6'/>, IspF<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase]]<ref name='LIB:EcoCyc11.1'/>
''ECK2741, b2746, JW2716, ygbB''<ref name='LIB:Riley_2006'/>, ygbB''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase monomer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase]]<ref name='LIB:EcoCyc11.1'/>


2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECP) synthase; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis; essential gene; trimeric<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase<ref name='LIB:Riley_2006'/>, B2746<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IspF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2741, JW2716, ygbB, b2746''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s):   
transcription unit(s):   
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ispF&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11816]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001749&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ispF&loc=MG1655%3A2869802..2869323,W3110%3A2870436..2869957,DH10B%3A2962344..2961865,REL606%3A2766641..2766162,BW2952%3A2755135..2755614]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2755135&end=2755614&gene=ispF&aa=mrighgfdvhafggegpiiiggvripyekgllahsdgdvalhaltdallgaaalgdigklfpdtdpafkgadsrellreawrriqakgytlgnvdvtiiaqapkmlphipqmrvfiaedlgchmddvnvkattteklgftgrgegiaceavallikatk]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ispF+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ispF]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ispF

Gene Synonym(s)

ECK2741, b2746, JW2716, ygbB[1], ygbB

Product Desc.

2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase[2][3];

Component of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase[3]

2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECP) synthase; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis; essential gene; trimeric[4]

Product Synonyms(s)

2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase[1], B2746[2][1], YgbB[2][1], IspF[2][1] , ECK2741, JW2716, ygbB, b2746

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s):

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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