mutY:Quickview: Difference between revisions

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{{Tab On|Quickview|mutY}}{{Tab|Gene|mutY}}{{Tab|Gene Product(s)|mutY}}{{Tab|Expression|mutY}}{{Tab|Evolution|mutY}}{{Tab|On One Page|mutY}}{{TabsBottom}}
{{Tab On|Quickview|mutY}}{{Tab|Gene|mutY}}{{Tab|Gene Product(s)|mutY}}{{Tab|Expression|mutY}}{{Tab|Evolution|mutY}}{{Tab|On One Page|mutY}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[mutY:Gene|''mutY]]'' (synonyms: ''ECK2956, b2961, JW2928, micA'')<ref name='LIB:Riley_2006'/>
''mutY''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[mutY:Gene_Product(s)|MutY product]]<ref name='LIB:Riley_2006'/>: adenine DNA glycosylase<ref name='LIB:Riley_2006'/>, B2961<ref name='LIB:EcoCyc10.6'/>, MicA<ref name='LIB:EcoCyc10.6'/>, MutY<ref name='LIB:EcoCyc10.6'/>
''ECK2956, b2961, JW2928''<ref name='LIB:Riley_2006'/>, JW2928, micA, mutB''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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adenine glycosylase; G.C --> T.A transversions<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
adenine glycosylase; G.C --> T.A transversions<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


 
GC to TA transversions; adenine glycosylase, G-A repair; 2-hydroxyadenine DNA glycosylase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''adenine DNA glycosylase<ref name='LIB:Riley_2006'/>, B2961<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MicA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MutY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2956, JW2928, micA, mutB, b2961''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:mutY-yggX-mltC|mutY-yggX-mltC]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:txn_units:mutY-yggX|mutY-yggX]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:txn_units:mutY-yggX-mltC-nupG|mutY-yggX-mltC-nupG]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:mutY-yggX-mltC|mutY-yggX-mltC]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:mutY-yggX|mutY-yggX]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:mutY-yggX-mltC-nupG|mutY-yggX-mltC-nupG]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=mutY&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10627]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000620&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=mutY&loc=MG1655%3A3101035..3102087,W3110%3A3101669..3102721,REL606%3A2988674..2989726,DH10B%3A3196104..3197156,BW2952%3A2988183..2989235]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2988183&end=2989235&gene=mutY&aa=mqasqfsaqvldwydkygrktlpwqidktpykvwlsevmlqqtqvatvipyferfmarfptvtdlanapldevlhlwtglgyyararnlhkaaqqvatlhggkfpetfeevaalpgvgrstagailslslgkhfpildgnvkrvlarcyavsgwpgkkevenklwslseqvtpavgverfnqammdlgamictrskpkcslcplqngciaaannswalypgkkpkqtlpertgyflllqhedevllaqrppsglwgglycfpqfadeeslrqwlaqrqiaadnltqltafrhtfshfhldivpmwlpvssftgcmdegnalwynlaqppsvglaapverllqqlrtgapv]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=mutY+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=mutY]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

mutY

Gene Synonym(s)

ECK2956, b2961, JW2928[1], JW2928, micA, mutB

Product Desc.

adenine glycosylase; G.C --> T.A transversions[2][3]

GC to TA transversions; adenine glycosylase, G-A repair; 2-hydroxyadenine DNA glycosylase[4]

Product Synonyms(s)

adenine DNA glycosylase[1], B2961[2][1], MicA[2][1], MutY[2][1] , ECK2956, JW2928, micA, mutB, b2961

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): mutY-yggX-mltC[2], mutY-yggX[2], mutY-yggX-mltC-nupG[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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