rhaA:Quickview: Difference between revisions

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{|   id="R49b0227594bcb" class=" tableEdit New_Quickview_Table"


|-
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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[rhaA:Gene|''rhaA]]'' (synonyms: ''ECK3896, b3903, JW5561'')<ref name='LIB:Riley_2006'/>
''rhaA''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[rhaA:Gene_Product(s)|RhaA product]]<ref name='LIB:Riley_2006'/>: L-rhamnose isomerase product, B3903 product, L-rhamnose ketol-isomerase product
''ECK3896, b3903, JW5561''<ref name='LIB:Riley_2006'/>, JW5561''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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RHAMNISOM-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


L-Rhamnose isomerase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''L-rhamnose isomerase<ref name='LIB:Riley_2006'/>, B3903<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RhaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, L-rhamnose ketol-isomerase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3896, JW5561, b3903''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rhaBAD|rhaBAD]]<ref name='LIB:EcoCyc10.6'/>, OP00309  
transcription unit(s): [[:Category:Txn_unit:rhaBAD|rhaBAD]]<ref name='LIB:EcoCyc10.6'/>, OP00309  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rhaA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11867]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001798&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rhaA&loc=MG1655%3A4094005..4092746,W3110%3A3540699..3541958,REL606%3A4075470..4074205,DH10B%3A4193702..4192443,BW2952%3A3982415..3983674]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3982415&end=3983674&gene=rhaA&aa=mttqleqawelakqrfaavgidveealrqldrlpvsmhcwqgddvsgfenpegsltggiqatgnypgkarnaselradleqamrlipgpkrlnlhaiylesdtpvsrdqikpehfknwvewakanqlgldfnpscfshplsadgftlshaddsirqfwidhckasrrvsayfgeqlgtpsvmniwipdgmkditvdrlaprqrllaaldeviseklnpahhidavesklfgigaesytvgsnefymgyatsrqtalcldaghfhptevisdkisaamlyvpqlllhvsrpvrwdsdhvvllddetqaiaseivrhdlfdrvhigldffdasinriaawvigtrnmkkallralleptaelrkleaagdytarlalleeqkslpwqavwemycqrhdtpagsewlesvrayekeilsrrg]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rhaA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rhaA]]&nbsp;&nbsp;


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{{Quickview_table_help}}
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<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
RhaA also has L- lyxose isomerase activity and is needed for growth on L-lyxose (Badia, 1991).<ref name='LIB:EcoGene'/>




Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rhaA

Gene Synonym(s)

ECK3896, b3903, JW5561[1], JW5561

Product Desc.

L-Rhamnose isomerase[2]

Product Synonyms(s)

L-rhamnose isomerase[1], B3903[3][1], RhaA[3][1], L-rhamnose ketol-isomerase[3][1] , ECK3896, JW5561, b3903

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rhaBAD[3], OP00309

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


RhaA also has L- lyxose isomerase activity and is needed for growth on L-lyxose (Badia, 1991).[2]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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