puuR:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''puuR''  
''puuR''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1294, b1299, JW1292, ycjC''<ref name='LIB:Riley_2006'/>
''ECK1294, b1299, JW1292, ycjC''<ref name='LIB:Riley_2006'/>, ycjC''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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DNA-binding transcriptional repressor<ref name='LIB:Riley_2006'/>, YcjC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1299<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PuuR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''DNA-binding transcriptional repressor<ref name='LIB:Riley_2006'/>, YcjC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1299<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PuuR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1294, JW1292, ycjC, b1299''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
<GO_nr />
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=puuR&loc=MG1655:1359935..1360492,W3110:1363625..1364182,DH10B:1449331..1449888 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1449331&end=1449888&gene=puuR&aa=msdeglapgkrlseirqqqglsqrraaelsglthsaistieqdkvspaistlqkllkvyglslseffsepekpdepqvvinqddliemgsqgvsmklvhngnpnrtlamifetyqpgtttgerikhqgeeigtvlegeivltingqdyhlvagqsyaintgiphsfsntsagicriisahtpttf Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=puuR+AND+escherichia+coli Pubmed(puuR)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=puuR Textpresso(puuR)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=puuR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12431]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002286&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=puuR&loc=MG1655%3A1359935..1360492,W3110%3A1363625..1364182,DH10B%3A1449331..1449888,BW2952%3A1250784..1251341]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1250784&end=1251341&gene=puuR&aa=msdeglapgkrlseirqqqglsqrraaelsglthsaistieqdkvspaistlqkllkvyglslseffsepekpdepqvvinqddliemgsqgvsmklvhngnpnrtlamifetyqpgtttgerikhqgeeigtvlegeivltingqdyhlvagqsyaintgiphsfsntsagicriisahtpttf]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=puuR+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=puuR]]&nbsp;&nbsp;


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Latest revision as of 21:54, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

puuR

Gene Synonym(s)

ECK1294, b1299, JW1292, ycjC[1], ycjC

Product Desc.

DNA-binding transcriptional repressor[2][3]

Transcriptional repressor for the puu divergon; putrescine utilization pathway[4]

Product Synonyms(s)

DNA-binding transcriptional repressor[1], YcjC[2][1], B1299[2][1], PuuR[2][1] , ECK1294, JW1292, ycjC, b1299

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): puuD[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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