ppiD:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{| id="V49b0207e43b75"  class=" tableEdit New_Quickview_Table"   
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0435, b0441, JW0431, ybaU''<ref name='LIB:Riley_2006'/>
''ECK0435, b0441, JW0431, ybaU''<ref name='LIB:Riley_2006'/>, ybaU''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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peptidyl-prolyl cis-trans isomerase (rotamase D)<ref name='LIB:Riley_2006'/>, B0441<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PpiD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''peptidyl-prolyl cis-trans isomerase (rotamase D)<ref name='LIB:Riley_2006'/>, B0441<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PpiD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0435, JW0431, ybaU, b0441''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=ppiD&loc=MG1655:461139..463010,W3110:461139..463010,DH10B:400470..402341,REL606:433970..435841 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=433970&end=435841&gene=ppiD&aa=mmdslrtaanslvlkiifgiiivsfiltgvsgyligggnnyaakvndqeisrgqfenafnsernrmqqqlgdqyselaanegymktlrqqvlnrlidealldqyarelklgisdeqvkqaifatpafqvdgkfdnsryngilnqmgmtadqyaqalrnqlttqqlingvagtdfmlkgetdelaalvaqqrvvreatidvnalaakqpvteqeiasyyeqnknnfmtpeqfrvsyikldaatmqqpvsdadiqsyydqhqdqftqpqrtrysiiqtktedeakavldelnkggdfaalakeksadiisarnggdmgwledatipdelknaglkekgqlsgvikssvgflivrlddiqpakvksldevrddiaakvkhekaldayyalqqkvsdaasndteslagaeqaagvkatqtgwfskdnlpeelnfkpvadaifngglvgengapginsdiitvdgdrafvlrisehkpeavkpladvqeqvkalvqhnkaeqqakvdaekllvdlkagkgaeamqaaglkfgepktlsrsgrdpisqaafalplpakdkpsygmatdmqgnvvllaldevkqgsmpedqkkamvqgitqnnaqivfealmsnlrkeakikigdaleqq Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ppiD+AND+escherichia+coli Pubmed(ppiD)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=ppiD Textpresso(ppiD)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ppiD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6242]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002853&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ppiD&loc=MG1655%3A461139..463010,W3110%3A461139..463010,DH10B%3A400470..402341,REL606%3A433970..435841,BW2952%3A363898..365769]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=363898&end=365769&gene=ppiD&aa=mmdslrtaanslvlkiifgiiivsfiltgvsgyligggnnyaakvndqeisrgqfenafnsernrmqqqlgdqyselaanegymktlrqqvlnrlidealldqyarelklgisdeqvkqaifatpafqvdgkfdnsryngilnqmgmtadqyaqalrnqlttqqlingvagtdfmlkgetdelaalvaqqrvvreatidvnalaakqpvteqeiasyyeqnknnfmtpeqfrvsyikldaatmqqpvsdadiqsyydqhqdqftqpqrtrysiiqtktedeakavldelnkggdfaalakeksadiisarnggdmgwledatipdelknaglkekgqlsgvikssvgflivrlddiqpakvksldevrddiaakvkhekaldayyalqqkvsdaasndteslagaeqaagvkatqtgwfskdnlpeelnfkpvadaifngglvgengapginsdiitvdgdrafvlrisehkpeavkpladvqeqvkalvqhnkaeqqakvdaekllvdlkagkgaeamqaaglkfgepktlsrsgrdpisqaafalplpakdkpsygmatdmqgnvvllaldevkqgsmpedqkkamvqgitqnnaqivfealmsnlrkeakikigdaleqq]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ppiD+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ppiD]]&nbsp;&nbsp;


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Latest revision as of 21:54, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ppiD

Gene Synonym(s)

ECK0435, b0441, JW0431, ybaU[1], ybaU

Product Desc.

G6242[2][3]

Peptidylprolyl-cis-trans-isomerase D, rotamase; involved in the folding of outer membrane proteins[4]

Product Synonyms(s)

peptidyl-prolyl cis-trans isomerase (rotamase D)[1], B0441[2][1], YbaU[2][1], PpiD[2][1] , ECK0435, JW0431, ybaU, b0441

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ppiD[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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PpiD is a periplasmic enyzyme with N-terminal membrane anchor. Heat-inducible. An fkpA, surA, ppiB, ppiD quadruple mutant is viable.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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