acrB:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[acrB:Gene|''acrB]]'' (synonyms: ''ECK0456, b0462, JW0451, G8006'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''acrB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[acrB:Gene_Product(s)|AcrB product]]<ref name='LIB:Riley_2006'/>: multidrug efflux system protein product, B0462 product
''ECK0456, b0462, JW0451, G8006''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, acrE''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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AcrB RND-type permease<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
AcrB RND-type permease<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:AcrAB-TolC Multidrug Efflux System|AcrAB-TolC Multidrug Efflux System]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:AcrAB-TolC Multidrug Efflux System|AcrAB-TolC Multidrug Efflux System]]<ref name='LIB:EcoCyc10.6'/>; [[:Category:Complex:AcrAB-TolC Multidrug Efflux System|AcrAB-TolC Multidrug Efflux Transport System]]<ref name='LIB:EcoCyc11.1'/>


AcrAB-TolC multidrug efflux pump; additionally dye, detergent and solvent resistance; RND-type transporter<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''multidrug efflux system protein<ref name='LIB:Riley_2006'/>, B0462<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AcrB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , acrE, ECK0456, JW0451, b0462''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:acrAB|acrAB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:acrAB|acrAB]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=acrB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11704]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001647&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=acrB&loc=MG1655%3A483627..480478,W3110%3A483627..480478,DH10B%3A422958..419809,REL606%3A456470..453321,BW2952%3A383237..386386]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=383237&end=386386&gene=acrB&aa=mpnffidrpifawviaiiimlagglailklpvaqyptiappavtisasypgadaktvqdtvtqvieqnmngidnlmymssnsdstgtvqitltfesgtdadiaqvqvqnklqlampllpqevqqqgvsvekssssflmvvgvintdgtmtqedisdyvaanmkdaisrtsgvgdvqlfgsqyamriwmnpnelnkfqltpvdvitaikaqnaqvaagqlggtppvkgqqlnasiiaqtrltsteefgkillkvnqdgsrvllrdvakielggenydiiaefngqpasglgiklatganaldtaaairaelakmepffpsglkivypydttpfvkisihevvktlveaiilvflvmylflqnfratliptiavpvvllgtfavlaafgfsintltmfgmvlaigllvddaivvvenvervmaeeglppkeatrksmgqiqgalvgiamvlsavfvpmaffggstgaiyrqfsitivsamalsvlvaliltpalcatmlkpiakgdhgegkkgffgwfnrmfeksthhytdsvggilrstgrylvlyliivvgmaylfvrlpssflpdedqgvfmtmvqlpagatqertqkvlnevthyyltkeknnvesvfavngfgfagrgqntgiafvslkdwadrpgeenkveaitmratrafsqikdamvfafnlpaivelgtatgfdfelidqaglghekltqarnqllaeaakhpdmltsvrpngledtpqfkididqekaqalgvsindinttlgaawggsyvndfidrgrvkkvyvmseakyrmlpddigdwyvraadgqmvpfsafsssrweygsprlerynglpsmeilgqaapgkstgeamelmeqlasklptgvgydwtgmsyqerlsgnqapslyaislivvflclaalyeswsipfsvmlvvplgvigallaatfrgltndvyfqvgllttiglsaknailivefakdlmdkegkglieatldavrmrlrpilmtslafilgvmplvistgagsgaqnavgtgvmggmvtatvlaiffvpvffvvvrrrfsrknediehshtvdhh]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=acrB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=acrB]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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acrB is an acrF paralog. AcrB exists as a homotrimer. It is in the Mar regulon. HT_Cmplx27_Mem: AcrB+MdtF.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

acrB

Gene Synonym(s)

ECK0456, b0462, JW0451, G8006[1][2], acrE

Product Desc.

AcrB RND-type permease[2][3];

Component of AcrAB-TolC Multidrug Efflux System[2]; AcrAB-TolC Multidrug Efflux Transport System[3]

AcrAB-TolC multidrug efflux pump; additionally dye, detergent and solvent resistance; RND-type transporter[4]

Product Synonyms(s)

multidrug efflux system protein[1], B0462[2][1], AcrB[2][1] , acrE, ECK0456, JW0451, b0462

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): acrAB[2]

Regulation/Activity
Quick Links



        

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Notes

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acrB is an acrF paralog. AcrB exists as a homotrimer. It is in the Mar regulon. HT_Cmplx27_Mem: AcrB+MdtF.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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