allR:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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{|   id="B49aedfa945a26"  class=" tableEdit New_Quickview_Table"   


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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''allR''  
''allR''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0499, b0506, JW0494, gclR, glxA3, ybbU''<ref name='LIB:Riley_2006'/>
''ECK0499, b0506, JW0494, gclR, glxA3, ybbU''<ref name='LIB:Riley_2006'/>, ybbU''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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AllR transcriptional regulator<ref name='LIB:EcoCyc10.6'/>; AllR transcriptional repressor<ref name='LIB:EcoCyc11.1'/>
AllR transcriptional regulator<ref name='LIB:EcoCyc10.6'/>; AllR transcriptional repressor<ref name='LIB:EcoCyc11.1'/>
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Repressor for all (allantoin) and gcl (glyoxylate) operons; glyoxylate-induced<ref name='LIB:EcoGene'/>
Repressor for all (allantoin) and gcl (glyoxylate) operons; glyoxylate-induced<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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DNA-binding transcriptional repressor<ref name='LIB:Riley_2006'/>, B0506<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbbU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AllR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''DNA-binding transcriptional repressor<ref name='LIB:Riley_2006'/>, B0506<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbbU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AllR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0499, glxA3, JW0494, ybbU, b0506''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:allR|allR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:allR|allR]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=allR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6276]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002884&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=allR&loc=MG1655%3A532235..533050,W3110%3A532235..533050,DH10B%3A471566..472381,REL606%3A505177..505992,BW2952%3A434994..435809]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=434994&end=435809&gene=allR&aa=mtevrrrgrpgqaepvaqkgaqalergiailqyleksggsssvsdislnldlplsttfrllkvlqaadfvyqdsqlgwwhiglgvfnvgaayihnrdvlsvagpfmrrlmllsgetvnvairngneavligqlecksmvrmcaplgsrlplhasgagkallyplaeeelmsiilqtglqqftpttlvdmptllkdleqarelgytvdkeehvvglnciasaiyddvgsvvaaisisgpssrltedrfvsqgelvrdtardistalglkahp]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=allR+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=allR]]&nbsp;&nbsp;


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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

allR

Gene Synonym(s)

ECK0499, b0506, JW0494, gclR, glxA3, ybbU[1], ybbU

Product Desc.

AllR transcriptional regulator[2]; AllR transcriptional repressor[3]

Repressor for all (allantoin) and gcl (glyoxylate) operons; glyoxylate-induced[4]

Product Synonyms(s)

DNA-binding transcriptional repressor[1], B0506[2][1], YbbU[2][1], AllR[2][1] , ECK0499, glxA3, JW0494, ybbU, b0506

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): allR[2]

Regulation/Activity
Quick Links



        

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Notes

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IclR family.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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