alpA:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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|-
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
''alpA''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2620, b2624, JW2604, alp''<ref name='LIB:Riley_2006'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
AlpA transcriptional activator; CP4-57 prophage<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
Alp protease, CP4-57 putative defective prophage; regulates intA (slp [suppressor of Lon])<ref name='LIB:EcoGene'/>
|-
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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''CP4-57 prophage; DNA-binding transcriptional activator<ref name='LIB:Riley_2006'/>, Alp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B2624<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AlpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2620, JW2604, b2624''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:alpA|alpA]]<ref name='LIB:EcoCyc10.6'/>
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
|-
!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=alpA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12112]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002016&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=alpA&loc=MG1655%3A2756666..2756878,W3110%3A2757300..2757512,DH10B%3A2848431..2848643,BW2952%3A2642478..2642690]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2642478&end=2642690&gene=alpA&aa=mnnrsavrilrlpaviqktgmaratiydwlnpksprydatfpkkrmlgvksvgwieaeidewlsqrckli]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=alpA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=alpA]]&nbsp;&nbsp;


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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

alpA

Gene Synonym(s)

ECK2620, b2624, JW2604, alp[1]

Product Desc.

AlpA transcriptional activator; CP4-57 prophage[2][3]

Alp protease, CP4-57 putative defective prophage; regulates intA (slp [suppressor of Lon])[4]

Product Synonyms(s)

CP4-57 prophage; DNA-binding transcriptional activator[1], Alp[2][1], B2624[2][1], AlpA[2][1] , ECK2620, JW2604, b2624

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): alpA[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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