alpA:Quickview: Difference between revisions

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Quickview

Standard Name	alpA
Gene Synonym(s)	ECK2620, b2624, JW2604, alp^[1]
Product Desc.	AlpA transcriptional activator; CP4-57 prophage^[2]^[3] Alp protease, CP4-57 putative defective prophage; regulates intA (slp [suppressor of Lon])^[4]
Product Synonyms(s)	CP4-57 prophage; DNA-binding transcriptional activator^[1], Alp^[2]^[1], B2624^[2]^[1], AlpA^[2]^[1] , ECK2620, JW2604, b2624
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression	transcription unit(s): alpA^[2]
Regulation/Activity
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Notes

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References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[LIB:Riley_2006-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoGene-4] EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[1]

[2]

[3]

[4]

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 |-
-!{{table_heading_style}} |Gene Name
+!align=left {{table_heading_style}} |Standard Name
-|
+||
-[[alpA:Gene|''alpA]]'' (synonyms: ''ECK2620, b2624, JW2604, alp'')<ref name='LIB:Riley_2006'/>
+''alpA''
 |-
-!{{table_heading_style}} |Product(s)
+!align=left {{table_heading_style}} |Gene Synonym(s)
-|
+||
-[[alpA:Gene_Product(s)|AlpA product]]<ref name='LIB:Riley_2006'/>: CP4-57 prophage; DNA-binding transcriptional activator product, Alp product, B2624 product
+''ECK2620, b2624, JW2604, alp''<ref name='LIB:Riley_2006'/>
 |-
-!{{table_heading_style}} |Description
+!align=left {{table_heading_style}} |Product Desc.
-|
+||
 AlpA transcriptional activator; CP4-57 prophage<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
+Alp protease, CP4-57 putative defective prophage; regulates intA (slp [suppressor of Lon])<ref name='LIB:EcoGene'/>
+|-
+!align=left {{table_heading_style}} |Product Synonyms(s)
+||
+''CP4-57 prophage; DNA-binding transcriptional activator<ref name='LIB:Riley_2006'/>, Alp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B2624<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AlpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2620, JW2604, b2624''
+|-
+!align=left {{table_heading_style}} |Function from GO
+||
+<GO_nr />
 |-
-!{{table_heading_style}} |Knock-Out Phenotype
+!align=left {{table_heading_style}} |Knock-Out Phenotype
-|
+||
 |-
-!{{table_heading_style}} |Regulation/Expression
+!align=left {{table_heading_style}} |Regulation/Expression
-|
+||
 transcription unit(s): [[:Category:Txn_unit:alpA|alpA]]<ref name='LIB:EcoCyc10.6'/>
 |-
-!{{table_heading_style}} |Regulation/Activity
+!align=left {{table_heading_style}} |Regulation/Activity
-|
+||
 |-
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+!align=left {{table_heading_style}} |Quick Links
+||
+[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=alpA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12112]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002016&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=alpA&loc=MG1655%3A2756666..2756878,W3110%3A2757300..2757512,DH10B%3A2848431..2848643,BW2952%3A2642478..2642690]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2642478&end=2642690&gene=alpA&aa=mnnrsavrilrlpaviqktgmaratiydwlnpksprydatfpkkrmlgvksvgwieaeidewlsqrckli]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=alpA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=alpA]]&nbsp;&nbsp;
+|- class="tableEdit_footer"
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.7002.Q49aedfb0986a0&page=7002&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
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 {{Quickview_table_help}}
 <protect><!--Quickview_notes--></protect>
 ===Notes===
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 ==References==
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-{{RefHelp}}
 <references/>
 </noinclude>

alpA:Quickview: Difference between revisions

Latest revision as of 21:53, 27 May 2013

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