azoR:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''azoR''  
''azoR''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1405, b1412, JW1409, acpD''<ref name='LIB:Riley_2006'/>
''ECK1405, b1412, JW1409, acpD''<ref name='LIB:Riley_2006'/>, acpD''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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NADH-azoreductase, FMN-dependent<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
NADH-azoreductase, FMN-dependent<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Azoreductase, NADH-dependent<ref name='LIB:EcoGene'/>
Azoreductase, NADH-dependent<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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NADH-azoreductase, FMN-dependent<ref name='LIB:Riley_2006'/>, B1412<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AzoR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AcpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''NADH-azoreductase, FMN-dependent<ref name='LIB:Riley_2006'/>, B1412<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AzoR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AcpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , acpD, ECK1405, JW1409, b1412''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:azoR|azoR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:azoR|azoR]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=azoR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6731]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003324&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=azoR&loc=MG1655%3A1480884..1480279,W3110%3A1484574..1483969,DH10B%3A1571479..1570874,BW2952%3A1372338..1372943]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1372338&end=1372943&gene=azoR&aa=mskvlvlkssilagysqsnqlsdyfveqwrekhsadeitvrdlaanpipvldgelvgalrpsdapltprqqealalsdeliaelkahdviviaapmynfnistqlknyfdlvaragvtfrytengpeglvtgkkaivitsrggihkdgptdlvtpylstflgfigitdvkfvfaegiaygpemaakaqsdakaaidsivsa]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=azoR+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=azoR]]&nbsp;&nbsp;


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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

azoR

Gene Synonym(s)

ECK1405, b1412, JW1409, acpD[1], acpD

Product Desc.

NADH-azoreductase, FMN-dependent[2][3]

Azoreductase, NADH-dependent[4]

Product Synonyms(s)

NADH-azoreductase, FMN-dependent[1], B1412[2][1], AzoR[2][1], AcpD[2][1] , acpD, ECK1405, JW1409, b1412

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): azoR[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


AzoR was identifed by N-terminal sequencing in an acyl carrier protein phosphodiesterase preparation and mistaken for the acpD gene. The real acpD gene has been identified (yajB) and renamed acpH. PDB 1TIK is mislabeled as a ACP phosphodiesterase.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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