bglH:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[bglH:Gene|''bglH]]'' (synonyms: ''ECK3713, b3720, JW3698, yieC'')<ref name='LIB:Riley_2006'/>
''bglH''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[bglH:Gene_Product(s)|BglH product]]<ref name='LIB:Riley_2006'/>: carbohydrate-specific outer membrane porin, cryptic product, B3720 product, YieC product
''ECK3713, b3720, JW3698, yieC''<ref name='LIB:Riley_2006'/>, yieC''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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carbohydrate-specific outer membrane porin, cryptic<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
carbohydrate-specific outer membrane porin, cryptic<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Outer membrane beta-glucoside porin, cryptic; lamB paralog<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''carbohydrate-specific outer membrane porin, cryptic<ref name='LIB:Riley_2006'/>, B3720<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YieC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, BglH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3713, JW3698, yieC, b3720''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yieK|yieK]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yieK|yieK]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=bglH&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11364]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001333&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=bglH&loc=MG1655%3A3900243..3898627,W3110%3A3734461..3736077,DH10B%3A3997827..3996211,REL606%3A3860973..3862589,BW2952%3A3786960..3788576]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3786960&end=3788576&gene=bglH&aa=mfrrnlitsaillmaplafsaqslaesltveqrlellekalretqselkkykdeekkkytpatvnrsvstndqgyaanpfptssaakpdavlvkneeknasetgsiyssmtlkdfskfvkdeigfsyngyyrsgwgtashgspkswaigslgrfgneysgwfdlqlkqrvynengkrvdavvmmdgnvgqqystgwfgdnaggenymqfsdmyvttkgflpfapeadfwvgkhgapkieiqmldwktqrtdaaagvglenwkvgpgkidialvredvddydrslqnkqqintntidlrykdiplwdkatlmvsgryvtanesasekdnqdnngyydwkdtwmfgtsltqkfdkggfnefsflvannsiasnfgryagaspfttfngryygdhtggtavrltsqgeayigdhfivanaivysfgndiysyetgahsdfesiravvrpayiwdqynqtgvelgyftqqnkdansnkfnesgykttlfhtfkvntsmltsrpeirfyatyikaleneldgftfednkddqfavgaqaeiww]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=bglH+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=bglH]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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This carbohydrate-specific porin preferentially binds arbutin, salicin and cellobiose. bglH is part of the cryptic bglGFBH operon. First 25 aa are predicted to be a type I signal peptide.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

bglH

Gene Synonym(s)

ECK3713, b3720, JW3698, yieC[1], yieC

Product Desc.

carbohydrate-specific outer membrane porin, cryptic[2][3]

Outer membrane beta-glucoside porin, cryptic; lamB paralog[4]

Product Synonyms(s)

carbohydrate-specific outer membrane porin, cryptic[1], B3720[2][1], YieC[2][1], BglH[2][1] , ECK3713, JW3698, yieC, b3720

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yieK[2]

Regulation/Activity
Quick Links



        

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Notes

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This carbohydrate-specific porin preferentially binds arbutin, salicin and cellobiose. bglH is part of the cryptic bglGFBH operon. First 25 aa are predicted to be a type I signal peptide.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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