cdh:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
Update TableEdit tables.
touch
 
(8 intermediate revisions by the same user not shown)
Line 23: Line 23:
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  
*  
****************************************************************************************** -->{{Quickview_table_help}}
****************************************************************************************** -->
{| id="Y49aee1bc11439"  class=" tableEdit New_Quickview_Table"   
{|   id="Y49aee1bc11439"  class=" tableEdit New_Quickview_Table"   


|-
|-
!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''cdh''  
''cdh''
|-
|-
!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK3910, b3918, JW3889''<ref name='LIB:Riley_2006'/>
''ECK3910, b3918, JW3889''<ref name='LIB:Riley_2006'/>, JW3889, pnuE, ushB''
|-
|-
!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
||


CDP-diglyceride hydrolase; Salmonella ortholog has both UDP sugar hydrolase (UshB) and NAD pyrophosphatase (PnuE) activities<ref name='LIB:EcoGene'/>
CDP-diglyceride hydrolase; Salmonella ortholog has both UDP sugar hydrolase (UshB) and NAD pyrophosphatase (PnuE) activities<ref name='LIB:EcoGene'/>
|-
|-
!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
CDP-diacylglycerol phosphotidylhydrolase<ref name='LIB:Riley_2006'/>, B3918<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cdh<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''CDP-diacylglycerol phosphotidylhydrolase<ref name='LIB:Riley_2006'/>, B3918<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cdh<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3910, JW3889, pnuE, ushB, b3918''
|-
|-
!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
||


|-
|-
!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:cdh|cdh]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:cdh|cdh]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
||


|-
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=cdh&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10138]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000134&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=cdh&loc=MG1655%3A4107953..4108708,W3110%3A3526751..3525996,REL606%3A4089412..4090167,DH10B%3A4207650..4208405,BW2952%3A3997622..3998377]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3997622&end=3998377&gene=cdh&aa=mkkagllflvmiviavvaagigywkltgeesdtlrkivleeclpnqqqnqnpspcaevkpnagyvvlkdlngplqyllmptyringtesplltdpstpnffwlawqardfmskkygqpvpdravslainsrtgrtqnhfhihiscirpdvrkqldnnlanissrwlplpgglrgheylarrvteselvqrspfmmlaeevpearehmgryglamvrqsdnsfvllatqrnlltlnrasaeeiqdhqceilr]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cdh+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cdh]]&nbsp;&nbsp;


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Latest revision as of 21:52, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

cdh

Gene Synonym(s)

ECK3910, b3918, JW3889[1], JW3889, pnuE, ushB

Product Desc.

CDP-diglyceride hydrolase; Salmonella ortholog has both UDP sugar hydrolase (UshB) and NAD pyrophosphatase (PnuE) activities[2]

Product Synonyms(s)

CDP-diacylglycerol phosphotidylhydrolase[1], B3918[3][1], Cdh[3][1] , ECK3910, JW3889, pnuE, ushB, b3918

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cdh[3]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


It is unclear if Cdh(E.c.) has UshB or PnuE activity. E. coli is UshB- and cloned cdh does not confer UshB activity, but protein expression is undetectable due to poor translation of cdh(ushB) mRNA[2]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=cdh:Quickview&oldid=1397560"