cfa:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
imported>WikiEntryBot
Automated import of articles
touch
 
(14 intermediate revisions by 2 users not shown)
Line 17: Line 17:
|}
|}
</noinclude>
</noinclude>
<!--box uid=421aa90e079fa326b6494f812ad13e79.5075.R46a99e6f6d97b-->
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.5075.H49aee1c1bef74-->
<!--
<!--
******************************************************************************************
******************************************************************************************
*
*  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|{{Prettytable}}
{|   id="H49aee1c1bef74"  class=" tableEdit New_Quickview_Table" 
 
|-
|-
!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
|
||
[[cfa:Gene|''cfa]]'' (synonyms: ''ECK1657, b1661, JW1653, cdfA'')<ref name='LIB:Riley_2006'/>
''cfa''
|-
|-
!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
|
||
[[cfa:Gene_Product(s)|Cfa product]]<ref name='LIB:Riley_2006'/>: cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) product, B1661 product, CdfA product
''ECK1657, b1661, JW1653, cdfA''<ref name='LIB:Riley_2006'/>, cdfA''
|-
|-
!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
|
||
Cfa<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
Cfa<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:cyclopropane fatty acyl phospholipid synthase|cyclopropane fatty acyl phospholipid synthase]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:cyclopropane fatty acyl phospholipid synthase|cyclopropane fatty acyl phospholipid synthase]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Cyclopropane fatty acid synthase; CFA lipid modification is required for acid resistance in early stationary phase<ref name='LIB:EcoGene'/>
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase)<ref name='LIB:Riley_2006'/>, B1661<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cfa<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CdfA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , cdfA, ECK1657, JW1653, b1661''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
|-
!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
|
||


|-
|-
!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
|
||
transcription unit(s): [[:Category:Txn_unit:cfa|cfa]]<ref name='LIB:EcoCyc10.6'/>, cdfA  
transcription unit(s): [[:Category:Txn_unit:cfa|cfa]]<ref name='LIB:EcoCyc10.6'/>, cdfA  
|-
|-
!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
|
||


|-
|-
|colspan='2'|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.5075.R46a99e6f6d97b&page=5075&pagename={{FULLPAGENAMEE}} edit table]
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=cfa&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11531]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001485&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=cfa&loc=MG1655%3A1739437..1740585,W3110%3A1743127..1744275,DH10B%3A1830008..1831156,REL606%3A1718680..1719828,BW2952%3A1631496..1632644]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1631496&end=1632644&gene=cfa&aa=mssscieevsvpddnwyrianellsragiaingsapadirvknpdffkrvlqegslglgesymdgwwecdrldmffskvlraglenqlphhfkdtlriagarlfnlqskkrawivgkehydlgndlfsrmldpfmqyscaywkdadnlesaqqaklkmiceklqlkpgmrvldigcgwgglahymasnydvsvvgvtisaeqqkmaqercegldvtillqdyrdlndqfdrivsvgmfehvgpknydtyfavvdrnlkpegifllhtigskktdlnvdpwinkyifpngclpsvrqiaqssephfvmedwhnfgadydttlmawyerflaawpeiadnyserfkrmftyylnacagafrardiqlwqvvfsrgvenglrvar]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cfa+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cfa]]&nbsp;&nbsp;
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.5075.H49aee1c1bef74&page=5075&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.5075.R46a99e6f6d97b-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.5075.H49aee1c1bef74--></protect>
{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
Cfa binds a bicarbonate ion that is involved in catalysis. RpoS regulon.  Overexpression causes abnormal biofilm architecture.<ref name='LIB:EcoGene'/>




Line 65: Line 83:
==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
</noinclude>
</noinclude>

Latest revision as of 21:52, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

cfa

Gene Synonym(s)

ECK1657, b1661, JW1653, cdfA[1], cdfA

Product Desc.

Cfa[2][3];

Component of cyclopropane fatty acyl phospholipid synthase[2][3]

Cyclopropane fatty acid synthase; CFA lipid modification is required for acid resistance in early stationary phase[4]

Product Synonyms(s)

cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase)[1], B1661[2][1], Cfa[2][1], CdfA[2][1] , cdfA, ECK1657, JW1653, b1661

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cfa[2], cdfA

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Cfa binds a bicarbonate ion that is involved in catalysis. RpoS regulon. Overexpression causes abnormal biofilm architecture.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=cfa:Quickview&oldid=1397557"