cobC:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''cobC''  
''cobC''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0631, b0638, JW0633, phpB''<ref name='LIB:Riley_2006'/>
''ECK0631, b0638, JW0633, phpB''<ref name='LIB:Riley_2006'/>, phpB''
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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Probable alpha-ribazole-5'-phosphate phosphatase; potential partial cobalamin biosynthesis pathway<ref name='LIB:EcoGene'/>
Probable alpha-ribazole-5'-phosphate phosphatase; potential partial cobalamin biosynthesis pathway<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted alpha-ribazole-5'-P phosphatase<ref name='LIB:Riley_2006'/>, PhpB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0638<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CobC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted alpha-ribazole-5'-P phosphatase<ref name='LIB:Riley_2006'/>, PhpB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0638<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CobC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0631, JW0633, phpB, b0638''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:cobC|cobC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:cobC|cobC]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=cobC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6349]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002956&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=cobC&loc=MG1655%3A669130..668519,W3110%3A670329..669718,DH10B%3A608462..607851,DH10B%3A721722..721111,REL606%3A651880..652491,BW2952%3A571279..571890]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=571279&end=571890&gene=cobC&aa=mrlwlirhgetqanidglysghaptpltargieqaqnlhtllhgvsfdlvlcseleraqhtarlvlsdrqlpvqiipelnemffgdwemrhhrdlmqedaenysawcndwqhaiptngegfqafsqrverfiarlsefqhyqnilvvshqgvlslliarligmpaeamwhfrvdqgcwsaidinqkfatlrvlnsraigvena]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cobC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cobC]]&nbsp;&nbsp;


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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

cobC

Gene Synonym(s)

ECK0631, b0638, JW0633, phpB[1], phpB

Product Desc.

Probable alpha-ribazole-5'-phosphate phosphatase; potential partial cobalamin biosynthesis pathway[2]

Product Synonyms(s)

predicted alpha-ribazole-5'-P phosphatase[1], PhpB[3][1], B0638[3][1], CobC[3][1] , ECK0631, JW0633, phpB, b0638

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cobC[3]

Regulation/Activity
Quick Links



        

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Notes

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Primarily characterized in Salmonella.[2]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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