cynR:Quickview: Difference between revisions

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{|   id="S49aee2d817996"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[cynR:Gene|''cynR]]'' (synonyms: ''ECK0335, b0338, JW5894'')<ref name='LIB:Riley_2006'/>
''cynR''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[cynR:Gene_Product(s)|CynR product]]<ref name='LIB:Riley_2006'/>: DNA-binding transcriptional dual regulator product, B0338 product, cyn operon positive regulator product
''ECK0335, b0338, JW5894''<ref name='LIB:Riley_2006'/>, JW5894''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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CynR transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
CynR transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Transcriptional activator of cyn operon<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA-binding transcriptional dual regulator<ref name='LIB:Riley_2006'/>, B0338<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CynR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, cyn operon positive regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0335, JW5894, b0338''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:cynR|cynR]]<ref name='LIB:EcoCyc10.6'/>, OP00194  
transcription unit(s): [[:Category:Txn_unit:cynR|cynR]]<ref name='LIB:EcoCyc10.6'/>, OP00194  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=cynR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11421]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001385&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=cynR&loc=MG1655%3A357914..357015,W3110%3A357914..357015,REL606%3A331246..330347]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=331246&end=330347&gene=cynR&aa=mlsrhinyflavaehgsftraasalhvsqpalsqqirqleeslgvplfdrsgrtirltdagevwrqyasralqelgagkraihdvadltrgslriavtptftsyfigplmadfyarypsitlqlqemsqekiedmlcrdeldvgiafapvhspeleaipllteslalvvaqhhplavheqvalsrlhdeklvllsaefatreqidhycekaglhpqvvieansisavlelirrtslstllpaaiatqhdglkaislappllertavllrrknswqtaaakaflhmaldkcavvggnesr]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cynR+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cynR]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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The CynR translation start site has been verified by start codon mutagenesis (Lamblin, 1993). LysR family.<ref name='LIB:EcoGene'/>




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Latest revision as of 21:51, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

cynR

Gene Synonym(s)

ECK0335, b0338, JW5894[1], JW5894

Product Desc.

CynR transcriptional dual regulator[2][3]

Transcriptional activator of cyn operon[4]

Product Synonyms(s)

DNA-binding transcriptional dual regulator[1], B0338[2][1], CynR[2][1], cyn operon positive regulator[2][1] , ECK0335, JW5894, b0338

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cynR[2], OP00194

Regulation/Activity
Quick Links



        

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Notes

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The CynR translation start site has been verified by start codon mutagenesis (Lamblin, 1993). LysR family.[4]



References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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