dps:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0801, b0812, JW0797, pexB, vtm''<ref name='LIB:Riley_2006'/>
''ECK0801, b0812, JW0797, pexB, vtm''<ref name='LIB:Riley_2006'/>, vtm''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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Fe-binding and storage protein<ref name='LIB:Riley_2006'/>, B0812<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Vtm<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PexB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dps<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''Fe-binding and storage protein<ref name='LIB:Riley_2006'/>, B0812<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Vtm<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PexB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dps<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0801, JW0797, pexB, vtm, b0812''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=dps&s=search PortEco search(dps)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=dps&loc=MG1655:848134..847631,W3110:849333..848830,DH10B:902062..901559,REL606:841536..841033,BW2952:750599..751102 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=750599&end=751102&gene=dps&aa=mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dps+AND+escherichia+coli Pubmed(dps)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=dps Textpresso(dps)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=dps&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11415]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001381&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=dps&loc=MG1655%3A848134..847631,W3110%3A849333..848830,DH10B%3A902062..901559,REL606%3A841536..841033,BW2952%3A750599..751102]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=750599&end=751102&gene=dps&aa=mstaklvkskatnllytrndvsdsekkatvellnrqviqfidlslitkqahwnmrganfiavhemldgfrtalidhldtmaeravqlggvalgttqvinsktplksypldihnvqdhlkeladryaivandvrkaigeakdddtadiltaasrdldkflwfiesnie]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dps+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=dps]]&nbsp;&nbsp;


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Latest revision as of 21:51, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

dps

Gene Synonym(s)

ECK0801, b0812, JW0797, pexB, vtm[1], vtm

Product Desc.

stationary phase nucleoid protein that sequesters iron and protects DNA from damage[2][3];

Component of Dps complex; stationary phase nucleoid component that sequesters iron and protects DNA from damage[3]

Stress response DNA-binding protein; starvation-induced resistance to H2O2; Fe-binding and storage protein; forms biocrystals with DNA[4]

Product Synonyms(s)

Fe-binding and storage protein[1], B0812[2][1], Vtm[2][1], PexB[2][1], Dps[2][1] , ECK0801, JW0797, pexB, vtm, b0812

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): dps[2], OP00242

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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dps is required for growth below 8C, which is enabled by transgenic Oleispira antarctica Cpn10/60.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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