epd:Quickview: Difference between revisions

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{|   id="F49aee4a6a2237"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[epd:Gene|''epd]]'' (synonyms: ''ECK2923, b2927, JW2894, gapB, gap2'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''epd''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[epd:Gene_Product(s)|Epd product]]<ref name='LIB:Riley_2006'/>: D-erythrose 4-phosphate dehydrogenase product, B2927 product, GapB product, Gap2 product
''ECK2923, b2927, JW2894, gapB, gap2''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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Epd<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
Epd<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:erythrose 4-phosphate dehydrogenase|erythrose 4-phosphate dehydrogenase]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:erythrose 4-phosphate dehydrogenase|erythrose 4-phosphate dehydrogenase]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Erythrose-4-P dehydrogenase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''D-erythrose 4-phosphate dehydrogenase<ref name='LIB:Riley_2006'/>, B2927<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Epd<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GapB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Gap2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2923, gapB, JW2894, b2927''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:epd-pgk-fbaA|epd-pgk-fbaA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:epd-pgk|epd-pgk]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:epd-pgk-fbaA|epd-pgk-fbaA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:epd-pgk|epd-pgk]]<ref name='LIB:EcoCyc10.6'/>  
|-
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=epd&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10368]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000361&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=epd&loc=MG1655%3A3071713..3070694,W3110%3A3072347..3071328,DH10B%3A3165583..3164564,REL606%3A2959442..2958423,BW2952%3A2957842..2958861]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2957842&end=2958861&gene=epd&aa=mtvrvaingfgrigrnvvralyesgrraeitvvaineladaagmahllkydtshgrfawevrqerdqlfvgddairvlherslqslpwrelgvdvvldctgvygsrehgeahiaagakkvlfshpgsndldatvvygvnqdqlraehrivsnascttnciipvikllddaygiesgtvttihsamhdqqvidayhpdlrrtraasqsiipvdtklaagitrffpqfndrfeaiavrvptinvtaidlsvtvkkpvkanevnlllqkaaqgafhgivdytelplvsvdfnhdphsaivdgtqtrvsgahliktlvwcdnewgfanrmldttlamatvafr]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=epd+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=epd]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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==References==
==References==
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Latest revision as of 21:51, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

epd

Gene Synonym(s)

ECK2923, b2927, JW2894, gapB, gap2[1][2]

Product Desc.

Epd[2][3];

Component of erythrose 4-phosphate dehydrogenase[2][3]

Erythrose-4-P dehydrogenase[4]

Product Synonyms(s)

D-erythrose 4-phosphate dehydrogenase[1], B2927[2][1], Epd[2][1], GapB[2][1], Gap2[2][1] , ECK2923, gapB, JW2894, b2927

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): epd-pgk-fbaA[2], epd-pgk[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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