hypC:Quickview: Difference between revisions

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{|   id="X49aee9a6b8b11" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[hypC:Gene|''hypC]]'' (synonyms: ''ECK2723, b2728, JW2698, hydB'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''hypC''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[hypC:Gene_Product(s)|HypC product]]<ref name='LIB:Riley_2006'/>: protein required for maturation of hydrogenases 1 and 3 product, B2728 product, HydB product
''ECK2723, b2728, JW2698, hydB''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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protein involved in hydrogenase 3 maturation<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
protein involved in hydrogenase 3 maturation<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Hydrogenase 3 chaperone-type protein; required for Hyd-3 metallocenter assembly, binds HycE subunit<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''protein required for maturation of hydrogenases 1 and 3<ref name='LIB:Riley_2006'/>, B2728<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HydB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HypC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2723, JW2698, b2728''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:hypBCDE-fhlA|hypBCDE-fhlA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:hypABCDE-fhlA|hypABCDE-fhlA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:hypBCDE|hypBCDE]]<ref name='LIB:EcoCyc10.6'/>, hydBEF, [[:Category:Txn_unit:hypABCDE|hypABCDE]]<ref name='LIB:EcoCyc10.6'/>, OP00209  
transcription unit(s): [[:Category:Txn_unit:hypBCDE-fhlA|hypBCDE-fhlA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:hypABCDE-fhlA|hypABCDE-fhlA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:hypBCDE|hypBCDE]]<ref name='LIB:EcoCyc10.6'/>, hydBEF, [[:Category:Txn_unit:hypABCDE|hypABCDE]]<ref name='LIB:EcoCyc10.6'/>, OP00209  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=hypC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10485]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000478&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=hypC&loc=MG1655%3A2849886..2850158,W3110%3A2850520..2850792,REL606%3A2746724..2746996,DH10B%3A2942428..2942700,BW2952%3A2735698..2735970]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2735698&end=2735970&gene=hypC&aa=mcigvpgqirtidgnqakvdvcgiqrdvdltlvgscdengqprvgqwvlvhvgfamsvineaeardtldalqnmfdvepdvgallygeek]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hypC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=hypC]]&nbsp;&nbsp;


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{{Quickview_table_help}}
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<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
N-terminal Cys is required for function.  hypC mutants have reduced Hyd-2 activity.<ref name='LIB:EcoGene'/>




Latest revision as of 21:49, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

hypC

Gene Synonym(s)

ECK2723, b2728, JW2698, hydB[1][2]

Product Desc.

protein involved in hydrogenase 3 maturation[2][3]

Hydrogenase 3 chaperone-type protein; required for Hyd-3 metallocenter assembly, binds HycE subunit[4]

Product Synonyms(s)

protein required for maturation of hydrogenases 1 and 3[1], B2728[2][1], HydB[2][1], HypC[2][1] , ECK2723, JW2698, b2728

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): hypBCDE-fhlA[2], hypABCDE-fhlA[2], hypBCDE[2], hydBEF, hypABCDE[2], OP00209

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


N-terminal Cys is required for function. hypC mutants have reduced Hyd-2 activity.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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