nrfF:Quickview: Difference between revisions

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{|{{Prettytable}}
{|   id="C49aeee6947b5f"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[nrfF:Gene|''nrfF]]'' (synonyms: ''ECK4068, b4075, JW4036, yjcM'')<ref name='LIB:Riley_2006'/>
''nrfF''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[nrfF:Gene_Product(s)|NrfF product]]<ref name='LIB:Riley_2006'/>: heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF product, B4075 product, YjcM product
''ECK4068, b4075, JW4036, yjcM''<ref name='LIB:Riley_2006'/>, yjcM''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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activator of formate-dependent nitrite reductase complex<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
activator of formate-dependent nitrite reductase complex<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Required for NrfA maturation; NrfEFG heme lyase complex; formate-dependent nitrite reduction<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF<ref name='LIB:Riley_2006'/>, B4075<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjcM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NrfF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4068, JW4036, yjcM, b4075''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:nrfABCDEFG|nrfABCDEFG]]<ref name='LIB:EcoCyc10.6'/>, OP00279, nrf  
transcription unit(s): [[:Category:Txn_unit:nrfABCDEFG|nrfABCDEFG]]<ref name='LIB:EcoCyc10.6'/>, OP00279, nrf  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=nrfF&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11949]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001876&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=nrfF&loc=MG1655%3A4291186..4291569,W3110%3A4296753..4297136,REL606%3A4272096..4272479,DH10B%3A4391659..4392042,BW2952%3A4230032..4230415]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4230032&end=4230415&gene=nrfF&aa=mnkglltllllftcfahaqvvdtwqfanpqqqqqalniasqlrcpqcqnqnllesnapvavsmrhqvysmvaegkneveiigwmterygdfvrynppltgqtlvlwalpvvllllmalilwrvrakr]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=nrfF+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=nrfF]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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==References==
==References==
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Latest revision as of 21:47, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

nrfF

Gene Synonym(s)

ECK4068, b4075, JW4036, yjcM[1], yjcM

Product Desc.

activator of formate-dependent nitrite reductase complex[2][3]

Required for NrfA maturation; NrfEFG heme lyase complex; formate-dependent nitrite reduction[4]

Product Synonyms(s)

heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF[1], B4075[2][1], YjcM[2][1], NrfF[2][1] , ECK4068, JW4036, yjcM, b4075

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): nrfABCDEFG[2], OP00279, nrf

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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