panE:Quickview: Difference between revisions

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{|   id="M49aeef2a24666"  class=" tableEdit New_Quickview_Table" 
 
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!align=left {{table_heading_style}} |Standard Name
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''panE''
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!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0419, b0425, JW0415, apbA''<ref name='LIB:Riley_2006'/>, apbA''
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Product Desc.
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[[panE:Gene|''panE]]'' (synonyms: ''ECK0419, b0425, JW0415, apbA'')<ref name='LIB:Riley_2006'/>
2-DEHYDROPANTOATE-
Ketopantoate reductase, NADPH-dependent; also indirectly involved in the alternative pathway for pyrimidine biosynthesis<ref name='LIB:EcoGene'/>
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Product Synonyms(s)
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[[panE:Gene_Product(s)|PanE product]]<ref name='LIB:Riley_2006'/>: 2-dehydropantoate reductase, NADPH-specific product, B0425 product, ketopantoate reductase product, 2-dehydropantoate 2-reductase product, (R)-pantoate:NADP+ 2-oxidoreductase product, ApbA product
''2-dehydropantoate reductase, NADPH-specific<ref name='LIB:Riley_2006'/>, B0425<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PanE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ketopantoate reductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, 2-dehydropantoate 2-reductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, (R)-pantoate:NADP+ 2-oxidoreductase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ApbA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , apbA, ECK0419, JW0415, b0425''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Function from GO
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2-DEHYDROPANTOATE-REDUCT-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
<GO_nr />
 
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yajL|yajL]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yajL|yajL]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=panE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6239]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002850&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=panE&loc=MG1655%3A443739..442828,W3110%3A443739..442828,DH10B%3A383070..382159,REL606%3A412026..412937,BW2952%3A345587..346498]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=345587&end=346498&gene=panE&aa=mkitvlgcgalgqlwltalckqghevqgwlrvpqpycsvnlvetdgsifnesltandpdflatsdlllvtlkawqvsdavkslastlpvttpillihngmgtieelqniqqpllmgttthaarrdgnviihvangithigparqqdgdysyladilqtvlpdvawhnniraelwrklavncvinpltaiwncpngelrhhpqeimqiceevaaviereghhtsaedlrdyvmqvidataenissmlqdiralrhteidyingfllrrarahgiavpentrlfemvkrkeseyerigtglprpw]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=panE+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=panE]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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Sequence verified by mass spectrometry (obs=33870), Met is not clipped.  False positive lipoprotein prediction, unprocessed, verified by mass spectrometry.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:47, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

panE

Gene Synonym(s)

ECK0419, b0425, JW0415, apbA[1], apbA

Product Desc.

2-DEHYDROPANTOATE- Ketopantoate reductase, NADPH-dependent; also indirectly involved in the alternative pathway for pyrimidine biosynthesis[2]

Product Synonyms(s)

2-dehydropantoate reductase, NADPH-specific[1], B0425[3][1], PanE[3][1], ketopantoate reductase[3][1], 2-dehydropantoate 2-reductase[3][1], (R)-pantoate:NADP+ 2-oxidoreductase[3][1], ApbA[3][1] , apbA, ECK0419, JW0415, b0425

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yajL[3]

Regulation/Activity
Quick Links



        

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Notes

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Sequence verified by mass spectrometry (obs=33870), Met is not clipped. False positive lipoprotein prediction, unprocessed, verified by mass spectrometry.[2]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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