rsd:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''rsd''  
''rsd''
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3987, b3995, JW3959, yjaE, G7819''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ECK3987, b3995, JW3959, yjaE, G7819''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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regulator of sigma D<ref name='LIB:EcoCyc10.6'/>; stationary phase protein, binds sigma 70 RNA polymerase subunit<ref name='LIB:EcoCyc11.1'/>
regulator of sigma D<ref name='LIB:EcoCyc10.6'/>; stationary phase protein, binds sigma 70 RNA polymerase subunit<ref name='LIB:EcoCyc11.1'/>
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Regulates RNA polymerase holoenzyme formation; interacts with free sigma 70 and core RNA polymerase; stationary phase protein; anti-sigma<ref name='LIB:EcoGene'/>
Regulates RNA polymerase holoenzyme formation; interacts with free sigma 70 and core RNA polymerase; stationary phase protein; anti-sigma<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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stationary phase protein, binds sigma 70 RNA polymerase subunit<ref name='LIB:Riley_2006'/>, B3995<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjaE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rsd<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''stationary phase protein, binds sigma 70 RNA polymerase subunit<ref name='LIB:Riley_2006'/>, B3995<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjaE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rsd<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3987, JW3959, yjaE, b3995''
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rsd|rsd]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rsd|rsd]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rsd&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11738]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001677&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rsd&loc=MG1655%3A4194831..4194355,W3110%3A3439873..3440349,REL606%3A4176420..4175944,DH10B%3A4294527..4294051,BW2952%3A4084035..4084511]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4084035&end=4084511&gene=rsd&aa=mlnqldnltervrgsnklvdrwlhvrkhllvayynlvgikpgkesymrlnekalddfcqslvdylsaghfsiyerilhklegngqlaraakiwpqleantqqimdyydssletaidhdnylefqqvlsdigealearfvledklillvldaarvkhpa]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rsd+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rsd]]&nbsp;&nbsp;


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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rsd

Gene Synonym(s)

ECK3987, b3995, JW3959, yjaE, G7819[1][2]

Product Desc.

regulator of sigma D[2]; stationary phase protein, binds sigma 70 RNA polymerase subunit[3]

Regulates RNA polymerase holoenzyme formation; interacts with free sigma 70 and core RNA polymerase; stationary phase protein; anti-sigma[4]

Product Synonyms(s)

stationary phase protein, binds sigma 70 RNA polymerase subunit[1], B3995[2][1], YjaE[2][1], Rsd[2][1] , ECK3987, JW3959, yjaE, b3995

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rsd[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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