sbcB:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
imported>WikiEntryBot
Automated import of articles
touch
 
(16 intermediate revisions by 3 users not shown)
Line 17: Line 17:
|}
|}
</noinclude>
</noinclude>
<!--box uid=421aa90e079fa326b6494f812ad13e79.5771.T46a99f12cc408-->
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.5771.Y49b024a296211-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
{|{{Prettytable}}
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|   id="Y49b024a296211"  class=" tableEdit New_Quickview_Table" 
 
|-
|-
!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
|
||
[[sbcB:Gene|''sbcB]]'' (synonyms: ''ECK2005, b2011, JW1993, xonA, cpeA, exoI, rmuA'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''sbcB''
|-
|-
!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
|
||
[[sbcB:Gene_Product(s)|SbcB product]]<ref name='LIB:Riley_2006'/>: exonuclease I product, B2011 product, RmuA product, XonA product, CpeA product, ExoI product
''ECK2005, b2011, JW1993, xonA, cpeA, exoI, rmuA''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
|-
|-
!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
|
||
exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Exonuclease I; suppresses recB recC mutations<ref name='LIB:EcoGene'/>
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''exonuclease I<ref name='LIB:Riley_2006'/>, B2011<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RmuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XonA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CpeA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SbcB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ExoI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , cpeA, ECK2005, JW1993, xonA, b2011''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
|-
!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
|
||


|-
|-
!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
|
||
transcription unit(s): [[:Category:Txn_unit:sbcB|sbcB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:sbcB|sbcB]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
|
||


|-
|-
|colspan='2'|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.5771.T46a99f12cc408&page=5771&pagename={{FULLPAGENAMEE}} edit table]
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=sbcB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10926]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000915&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=sbcB&loc=MG1655%3A2080780..2082207,W3110%3A2084893..2086320,REL606%3A2013199..2014626,DH10B%3A2171788..2173215,BW2952%3A1973263..1974690]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1973263&end=1974690&gene=sbcB&aa=mmndgkqqstflfhdyetfgthpaldrpaqfaairtdsefnvigepevfyckpaddylpqpgavlitgitpqearakgeneaafaarihslftvpktcilgynnvrfddevtrnifyrnfydpyawswqhdnsrwdlldvmracyalrpeginwpenddglpsfrlehltkangiehsnahdamadvyatiamaklvktrqprlfdylfthrnkhklmalidvpqmkplvhvsgmfgawrgntswvaplawhpenrnavimvdlagdisplleldsdtlrerlytaktdlgdnaavpvklvhinkcpvlaqantlrpedadrlginrqhcldnlkilrenpqvrekvvaifaeaepftpsdnvdaqlyngffsdadraamkivleteprnlpalditfvdkriekllfnyrarnfpgtldyaeqqrwlehrrqvftpeflqgyadelqmlvqqyaddkekvallkalwqyaeeiv]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=sbcB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=sbcB]]&nbsp;&nbsp;
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.5771.Y49b024a296211&page=5771&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.5771.T46a99f12cc408-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.5771.Y49b024a296211--></protect>
{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
The C-terminus of Ssb binds and stimulates Exonuclease I activity (Lu, 2008).<ref name='LIB:EcoGene'/>




Line 58: Line 81:
==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
</noinclude>
</noinclude>

Latest revision as of 21:46, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

sbcB

Gene Synonym(s)

ECK2005, b2011, JW1993, xonA, cpeA, exoI, rmuA[1][2]

Product Desc.

exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase[2][3]

Exonuclease I; suppresses recB recC mutations[4]

Product Synonyms(s)

exonuclease I[1], B2011[2][1], RmuA[2][1], XonA[2][1], CpeA[2][1], SbcB[2][1], ExoI[2][1] , cpeA, ECK2005, JW1993, xonA, b2011

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): sbcB[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


The C-terminus of Ssb binds and stimulates Exonuclease I activity (Lu, 2008).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=sbcB:Quickview&oldid=1396034"