slyB:Quickview: Difference between revisions

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{{Tab On|Quickview|slyB}}{{Tab|Gene|slyB}}{{Tab|Gene Product(s)|slyB}}{{Tab|Expression|slyB}}{{Tab|Evolution|slyB}}{{Tab|On One Page|slyB}}{{TabsBottom}}
{{Tab On|Quickview|slyB}}{{Tab|Gene|slyB}}{{Tab|Gene Product(s)|slyB}}{{Tab|Expression|slyB}}{{Tab|Evolution|slyB}}{{Tab|On One Page|slyB}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[slyB:Gene|''slyB]]'' (synonyms: ''ECK1637, b1641, JW1633'')<ref name='LIB:Riley_2006'/>
''slyB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[slyB:Gene_Product(s)|SlyB product]]<ref name='LIB:Riley_2006'/>: outer membrane lipoprotein product, B1641 product
''ECK1637, b1641, JW1633''<ref name='LIB:Riley_2006'/>, JW1633''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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putative outer membrane protein<ref name='LIB:EcoCyc10.6'/> outer membrane lipoprotein<ref name='LIB:EcoCyc11.1'/>  
putative outer membrane protein<ref name='LIB:EcoCyc10.6'/>; outer membrane lipoprotein<ref name='LIB:EcoCyc11.1'/>


Novel verified lipoprotein, function unknown<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''outer membrane lipoprotein<ref name='LIB:Riley_2006'/>, B1641<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SlyB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1637, JW1633, b1641''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:slyB|slyB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:slyB|slyB]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=slyB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6881]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003470&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=slyB&loc=MG1655%3A1717900..1718367,W3110%3A1721590..1722057,DH10B%3A1808471..1808938,REL606%3A1697070..1697537,BW2952%3A1609959..1610426]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1609959&end=1610426&gene=slyB&aa=mikrvlvvsmvglslvgcvnndtlsgdvytaseakqvqnvsygtivnvrpvqiqggddsnvigaiggavlggflgntvgggtgrslataagavaggvagqgvqsamnktqgveleirkddgntimvvqkqgntrfspgqrvvlasngsqvtvspr]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=slyB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=slyB]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
Mg(2+) stimulon. PhoPQ regulon. EvgAS-PhoPQ cascade enhanced-expression subset. First 17 aa are a type II signal peptide.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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<references/>
<references/>
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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

slyB

Gene Synonym(s)

ECK1637, b1641, JW1633[1], JW1633

Product Desc.

putative outer membrane protein[2]; outer membrane lipoprotein[3]

Novel verified lipoprotein, function unknown[4]

Product Synonyms(s)

outer membrane lipoprotein[1], B1641[2][1], SlyB[2][1] , ECK1637, JW1633, b1641

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): slyB[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


Mg(2+) stimulon. PhoPQ regulon. EvgAS-PhoPQ cascade enhanced-expression subset. First 17 aa are a type II signal peptide.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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