selU:Quickview: Difference between revisions

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{{Tab On|Quickview|ybbB}}{{Tab|Gene|ybbB}}{{Tab|Gene Product(s)|ybbB}}{{Tab|Expression|ybbB}}{{Tab|Evolution|ybbB}}{{Tab|On One Page|ybbB}}{{TabsBottom}}
{{Tab On|Quickview|selU}}{{Tab|Gene|selU}}{{Tab|Gene Product(s)|selU}}{{Tab|Expression|selU}}{{Tab|Evolution|selU}}{{Tab|On One Page|selU}}{{TabsBottom}}
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{|   id="K49b029e64f80f" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ybbB:Gene|''ybbB]]'' (synonyms: ''ECK0496, b0503, JW0491'')<ref name='LIB:Riley_2006'/>
''selU''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ybbB:Gene_Product(s)|YbbB product]]<ref name='LIB:Riley_2006'/>: tRNA 2-selenouridine synthase, selenophosphate-dependent product, B0503 product
''ECK0496, b0503, JW0491'', ybbB<ref name='LIB:Riley_2006'/>, JW0491, selE, ybbB''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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EG11768-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
EG11768<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


tRNA 2-selenouridine synthase, selenophosphate-dependent; replaces a sulfur atom in 2-thiouridine in tRNA with selenium; required for 5-methylaminomethyl-2-selenouridine synthesis<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''tRNA 2-selenouridine synthase, selenophosphate-dependent<ref name='LIB:Riley_2006'/>, B0503<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0496, JW0491, selE, ybbB, b0503''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s):   
transcription unit(s):   
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ybbB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11768]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001704&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ybbB&loc=MG1655%3A530450..529356,W3110%3A530450..529356,DH10B%3A469781..468687,BW2952%3A432115..433209]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=432115&end=433209&gene=ybbB&aa=mqerhteqdyralliadtpiidvrapiefehgampaainlplmnnderaavgtcykqqgsdaalalghklvageirqqrmdawraaclqnpqgilccarggqrshivqswlhaagidyplveggykalrqtaiqatielaqkpivliggctgsgktllvqqqpngvdleglarhrgsafgrtlqpqlsqasfenllaaemlktdarqnlrlwvledesrmigsnhlpeclrermtqaaiavvedpfeirlerlneeyflrmhhdfthaygdeqgwqeyceylhhglsaikrrlglqrynelaarldaalttqlttgstdghlawlvplleeyydpmyryqlekkaekvvfrgewaevaewvkar]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybbB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ybbB]]&nbsp;&nbsp;


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{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
YbbB has a rhodanese domain.<ref name='LIB:EcoGene'/>




Latest revision as of 21:44, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

selU

Gene Synonym(s)

ECK0496, b0503, JW0491, ybbB[1], JW0491, selE, ybbB

Product Desc.

EG11768[2][3]

tRNA 2-selenouridine synthase, selenophosphate-dependent; replaces a sulfur atom in 2-thiouridine in tRNA with selenium; required for 5-methylaminomethyl-2-selenouridine synthesis[4]

Product Synonyms(s)

tRNA 2-selenouridine synthase, selenophosphate-dependent[1], B0503[2][1], YbbB[2][1] , ECK0496, JW0491, selE, ybbB, b0503

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s):

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


YbbB has a rhodanese domain.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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