ybdO:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ybdO:Gene|''ybdO]]'' (synonyms: ''ECK0597, b0603, JW0596'')<ref name='LIB:Riley_2006'/>
''ybdO''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ybdO:Gene_Product(s)|YbdO product]]<ref name='LIB:Riley_2006'/>: predicted DNA-binding transcriptional regulator product, B0603 product
''ECK0597, b0603, JW0596''<ref name='LIB:Riley_2006'/>, JW0596''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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predicted DNA-binding transcriptional regulator LYSR-type<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
predicted DNA-binding transcriptional regulator LYSR-type<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Required for swarming phenotype, function unknown; probable LysR-family transcriptional regulator<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, B0603<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbdO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0597, JW0596, b0603''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ybdO|ybdO]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ybdO|ybdO]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ybdO&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6332]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002939&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ybdO&loc=MG1655%3A636841..635939,W3110%3A636841..635939,DH10B%3A576173..575271,DH10B%3A689433..688531,BW2952%3A538699..539601]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=538699&end=539601&gene=ybdO&aa=manlydlkkfdlnllvifeciyqhlsiskaaeslyitpsavsqslqrlraqfndplfirsgkgiaptttglnlhhhleknlrgleqtinivnkselkknfiiygpqliscsnnsmlirclrqdssveiechdilmsaenaeellvhrkadlvitqmpvisrsvicmplhtirntlicsnrhpritdnstyeqimaeeftqlisksagvddiqmeiderfmnrkisfrgsslltiinsiavtdllgivpyelynsyrdflnlkeiklehplpsiklyisynksslnnlvfsrfidrlnesf]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybdO+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ybdO]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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==References==
==References==
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Latest revision as of 21:44, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ybdO

Gene Synonym(s)

ECK0597, b0603, JW0596[1], JW0596

Product Desc.

predicted DNA-binding transcriptional regulator LYSR-type[2][3]

Required for swarming phenotype, function unknown; probable LysR-family transcriptional regulator[4]

Product Synonyms(s)

predicted DNA-binding transcriptional regulator[1], B0603[2][1], YbdO[2][1] , ECK0597, JW0596, b0603

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ybdO[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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