ydhR:Quickview: Difference between revisions
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* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1663, b1667, JW1657''<ref name='LIB:Riley_2006'/> | ''ECK1663, b1667, JW1657''<ref name='LIB:Riley_2006'/>, JW1657'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted protein<ref name='LIB:Riley_2006'/>, B1667<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdhR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''predicted protein<ref name='LIB:Riley_2006'/>, B1667<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdhR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1663, JW1657, b1667'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ydhR&loc=MG1655 | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ydhR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6895]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003484&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ydhR&loc=MG1655%3A1744724..1745029,W3110%3A1748414..1748719,DH10B%3A1835295..1835600,REL606%3A1723967..1724272,BW2952%3A1636783..1637088]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1636783&end=1637088&gene=ydhR&aa=matllqlhfafngpfgdamaeqlkplaesinqepgflwkvwteseknheaggiylftdeksalaylekhtarlknlgveevvakvfdvneplsqinqakla]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydhR+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ydhR]] | ||
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Latest revision as of 21:43, 27 May 2013
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
ydhR |
|---|---|
| Gene Synonym(s) |
ECK1663, b1667, JW1657[1], JW1657 |
| Product Desc. |
predicted mono-oxygenase[2][3]; Component of predicted mono-oxygenase[3] Putative monooxygenase, function unknown; dimeric[4] |
| Product Synonyms(s) |
predicted protein[1], B1667[2][1], YdhR[2][1] , ECK1663, JW1657, b1667 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
YdhR is structurally similar to YgiN and the ActVA-Orf6 hydroxyquinone monooxygenase. YdhR codon usage indicates a foreign gene, consistent with its location next to the valVW tRNA locus. Neighboring ydhS does not appear to be a foreign gene. The Swiss-Prot prediction of a signal peptide is not supported by SignalP.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.