ppsR:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
update QV table
touch
 
(9 intermediate revisions by the same user not shown)
Line 10: Line 10:
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}   
<noinclude>{{TabsTop}}   
{{Tab On|Quickview|ydiA}}{{Tab|Gene|ydiA}}{{Tab|Gene Product(s)|ydiA}}{{Tab|Expression|ydiA}}{{Tab|Evolution|ydiA}}{{Tab|On One Page|ydiA}}{{TabsBottom}}
{{Tab On|Quickview|ppsR}}{{Tab|Gene|ppsR}}{{Tab|Gene Product(s)|ppsR}}{{Tab|Expression|ppsR}}{{Tab|Evolution|ppsR}}{{Tab|On One Page|ppsR}}{{TabsBottom}}
{|
{|
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"  
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"  
Line 23: Line 23:
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  
*  
****************************************************************************************** -->{{Quickview_table_help}}
****************************************************************************************** -->
{| id="W49b02d44f044a"  class=" tableEdit New_Quickview_Table"   
{|   id="W49b02d44f044a"  class=" tableEdit New_Quickview_Table"   


|-
|-
!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''ydiA''  
''ppsR''
|-
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK1701, b1703, JW1693''<ref name='LIB:Riley_2006'/>
''ECK1701, b1703, JW1693'', ydiA<ref name='LIB:Riley_2006'/>, duf299, JW1693, ydiA''
|-
|-
!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
Line 43: Line 43:
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
conserved protein<ref name='LIB:Riley_2006'/>, B1703<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdiA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''conserved protein<ref name='LIB:Riley_2006'/>, B1703<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PpsR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , duf299, ECK1701, JW1693, ydiA, b1703''
|-
|-
!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
||
||
'''Molecular Function'''
<GO_nr />
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
 
|-
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
Line 57: Line 55:
!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:ydiA|ydiA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ppsR|ppsR]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
Line 65: Line 63:
!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
||
||
[http://ecoliwiki.net/tools/display_dna.php?gene=ydiA&loc=MG1655:1785469..1786302,W3110:1789159..1789992,DH10B:1876040..1876873,REL606:1764713..1765546 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1764713&end=1765546&gene=ydiA&aa=mdnavdrhvfyisdgtaitaevlghavmsqfpvtissitlpfvenesraravkdqidaiyhqtgvrplvfysivlpeiraiilqsegfcqdivqalvaplqqemkldptpiahrthglnpnnlnkydariaaidytlahddgislrnldqaqvillgvsrcgktptslylamqfgiraanypfiaddmdnlvlpaslkplqhklfgltidperlaaireerrensryaslrqcrmevaevealyrknqipwinstnysveeiatkildimglsrrmy Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydiA+AND+escherichia+coli Pubmed(ydiA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ydiA Textpresso(ydiA)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ydiA&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ydiA&loc=MG1655%3A1785469..1786302,W3110%3A1789159..1789992,DH10B%3A1876040..1876873,REL606%3A1764713..1765546,BW2952%3A1677528..1678361]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1677528&end=1678361&gene=ydiA&aa=mdnavdrhvfyisdgtaitaevlghavmsqfpvtissitlpfvenesraravkdqidaiyhqtgvrplvfysivlpeiraiilqsegfcqdivqalvaplqqemkldptpiahrthglnpnnlnkydariaaidytlahddgislrnldqaqvillgvsrcgktptslylamqfgiraanypfiaddmdnlvlpaslkplqhklfgltidperlaaireerrensryaslrqcrmevaevealyrknqipwinstnysveeiatkildimglsrrmy]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydiA+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ydiA]]&nbsp;&nbsp;


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Latest revision as of 21:43, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ppsR

Gene Synonym(s)

ECK1701, b1703, JW1693, ydiA[1], duf299, JW1693, ydiA

Product Desc.

conserved protein[2][3]

Function unknown[4]

Product Synonyms(s)

conserved protein[1], B1703[2][1], PpsR[2][1] , duf299, ECK1701, JW1693, ydiA, b1703

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ppsR[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]





References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=ppsR:Quickview&oldid=1395178"